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The map label for this gene is asdII [H]

Identifier: 21242039

GI number: 21242039

Start: 1473689

End: 1475191

Strand: Reverse

Name: asdII [H]

Synonym: XAC1286

Alternate gene names: 21242039

Gene position: 1475191-1473689 (Counterclockwise)

Preceding gene: 21242041

Following gene: 21242038

Centisome position: 28.5

GC content: 63.54

Gene sequence:

>1503_bases
GTGCCGGCCAGCTTCGCTGCCGAGGTCAAGGTCAACGGCACGTTGCGCGTGGACCAGCCCGGCGCGCAGGTGTCGCGGCA
ACTGTTCGGCCAATTCGCCGAGCATCTGGGTACCGGCATCTATGGTGGCGTGTGGGTGGGCGAGGAGTCGCCGATTCCCA
ACACGCACGGCTATCGCAACGACGTGGTCGCCGCACTGAAAGCCATTGCCGTCCCCAACATCCGCTGGCCCGGAGGTTGC
TTCGCCGACGAATACCACTGGCGCGATGGCGTCGGCACGCCGGCCAAGCGCCCGATCAGGGTCAACACGCACTGGGGCGG
TGTGGAAGAGTCCAACCGTTTCGGCACGCACGAGTTCATGGACTTTACCGAACTGCTCGGCACCCAGGCCTATATCGCCG
GGAACGTGGGCGATGCTGCGCCGGAGGAGATCGCGCAGTGGGCCGAATACATGACCGCGCCCACACGCTCGAGCCTGGCC
AACGAGCGCCGCGCCAATGGCCGCGATGCGCCCTGGCAGGTTCCCTACTTCGGTGTGGGTAACGAGTTGTGGGGCTGCGG
CGGCAATATGCGCGTGGAGTACGCAGCCGATGTATTTCGCCGCTACCAGACCTTCGTCAAGTCGCCGGCCAGCCAGAAGA
TCCTCAAGATCGCGCCTGGCCCAAGCGACGACGACTACCACTGGACCGAAGTGATGATGCGCGAGGCCTCCAAGTTCATG
GACGGGCTGAGCATGCACTACTACACCATTCCCGGTGGCTGGCCGCCGCGCGCGTCGTCGACCACGTTCGACGAAGCCGC
ATGGATCCAGACCTTGTCGCGCACCTTGGTGATGGACGAGCTGATCACCAAGCACAGCGCGATCATGGACAAGTACGACC
CAGCCAAGAAAGTGGCTCTGGTCGTGGACGAATGGGGCACCTGGTATGCGCCATTGCCAGGCACCAACCCCGGTTTCCTG
CAGCAGCAAAACAGCCTGCGCGACGCGCTGGTGGCGTCCCTCAACTTCGACATCTTCAGCCAGCATGCCGAGCGCGTGCG
CATGGCCAACATCGCGCAGATGGTCAATGTGCTGCAGGCGATGATCCTCACCGATGGCGACAAGATGGTGCTGACGCCCA
CCTACCACGTGTTTGCGCTTTACAAGCCCTACCAGGACGCCACCCACCTGCCGCTGCAATTGCAGACACCGCAATACCGT
CATGGCGATACGCAGGTGCCGGCAGTGCACGGCTCGGCGGTCAAGGCGAAGGATGGCCATGTGTATATCGCACTGACCAA
TCTGGACGCGAGCGCGTCGGCGACTGTGAGCGTGCAGGTGGAAGGGTTGCCGCTGCGTGCGGTGGAGGGACAGATCCTGA
CGGCACCGGCGATCGCCACGTACAACACCTATGCGCAGCCACAGGCCGTTGCGCCAGTGGCATTCAAGGGCGCACGTGTC
CAAGGCAAGACAGTGAACGTGGCGCTGCCGGCGCATTCGATCGTGATGCTCAAGCTGCAATGA

Upstream 100 bases:

>100_bases
GCACAGGAGCACCGACCCGATGCAGTGGATTTCCCCCGCGTTGCAGGCATCGCGCAGGCAGCTGTTGAACGCCGTTTTCG
TCGCCGCCTCGATTGCCAGC

Downstream 100 bases:

>100_bases
GCGATCGGATGCAATGCACAGGGCGTACGTGCCGGACACGGCCAGCCATGTGGGCACCGGGTTGCCTCGTTCGGACGCGC
CTTGCAAGGGAGCGCGATCG

Product: alpha-L-arabinosidase

Products: NA

Alternate protein names: Arabinosidase 2 [H]

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MPASFAAEVKVNGTLRVDQPGAQVSRQLFGQFAEHLGTGIYGGVWVGEESPIPNTHGYRNDVVAALKAIAVPNIRWPGGC
FADEYHWRDGVGTPAKRPIRVNTHWGGVEESNRFGTHEFMDFTELLGTQAYIAGNVGDAAPEEIAQWAEYMTAPTRSSLA
NERRANGRDAPWQVPYFGVGNELWGCGGNMRVEYAADVFRRYQTFVKSPASQKILKIAPGPSDDDYHWTEVMMREASKFM
DGLSMHYYTIPGGWPPRASSTTFDEAAWIQTLSRTLVMDELITKHSAIMDKYDPAKKVALVVDEWGTWYAPLPGTNPGFL
QQQNSLRDALVASLNFDIFSQHAERVRMANIAQMVNVLQAMILTDGDKMVLTPTYHVFALYKPYQDATHLPLQLQTPQYR
HGDTQVPAVHGSAVKAKDGHVYIALTNLDASASATVSVQVEGLPLRAVEGQILTAPAIATYNTYAQPQAVAPVAFKGARV
QGKTVNVALPAHSIVMLKLQ

Sequences:

>Translated_500_residues
MPASFAAEVKVNGTLRVDQPGAQVSRQLFGQFAEHLGTGIYGGVWVGEESPIPNTHGYRNDVVAALKAIAVPNIRWPGGC
FADEYHWRDGVGTPAKRPIRVNTHWGGVEESNRFGTHEFMDFTELLGTQAYIAGNVGDAAPEEIAQWAEYMTAPTRSSLA
NERRANGRDAPWQVPYFGVGNELWGCGGNMRVEYAADVFRRYQTFVKSPASQKILKIAPGPSDDDYHWTEVMMREASKFM
DGLSMHYYTIPGGWPPRASSTTFDEAAWIQTLSRTLVMDELITKHSAIMDKYDPAKKVALVVDEWGTWYAPLPGTNPGFL
QQQNSLRDALVASLNFDIFSQHAERVRMANIAQMVNVLQAMILTDGDKMVLTPTYHVFALYKPYQDATHLPLQLQTPQYR
HGDTQVPAVHGSAVKAKDGHVYIALTNLDASASATVSVQVEGLPLRAVEGQILTAPAIATYNTYAQPQAVAPVAFKGARV
QGKTVNVALPAHSIVMLKLQ
>Mature_499_residues
PASFAAEVKVNGTLRVDQPGAQVSRQLFGQFAEHLGTGIYGGVWVGEESPIPNTHGYRNDVVAALKAIAVPNIRWPGGCF
ADEYHWRDGVGTPAKRPIRVNTHWGGVEESNRFGTHEFMDFTELLGTQAYIAGNVGDAAPEEIAQWAEYMTAPTRSSLAN
ERRANGRDAPWQVPYFGVGNELWGCGGNMRVEYAADVFRRYQTFVKSPASQKILKIAPGPSDDDYHWTEVMMREASKFMD
GLSMHYYTIPGGWPPRASSTTFDEAAWIQTLSRTLVMDELITKHSAIMDKYDPAKKVALVVDEWGTWYAPLPGTNPGFLQ
QQNSLRDALVASLNFDIFSQHAERVRMANIAQMVNVLQAMILTDGDKMVLTPTYHVFALYKPYQDATHLPLQLQTPQYRH
GDTQVPAVHGSAVKAKDGHVYIALTNLDASASATVSVQVEGLPLRAVEGQILTAPAIATYNTYAQPQAVAPVAFKGARVQ
GKTVNVALPAHSIVMLKLQ

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 54975; Mature: 54844

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASFAAEVKVNGTLRVDQPGAQVSRQLFGQFAEHLGTGIYGGVWVGEESPIPNTHGYRN
CCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHH
DVVAALKAIAVPNIRWPGGCFADEYHWRDGVGTPAKRPIRVNTHWGGVEESNRFGTHEFM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH
DFTELLGTQAYIAGNVGDAAPEEIAQWAEYMTAPTRSSLANERRANGRDAPWQVPYFGVG
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCEEECC
NELWGCGGNMRVEYAADVFRRYQTFVKSPASQKILKIAPGPSDDDYHWTEVMMREASKFM
CCEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DGLSMHYYTIPGGWPPRASSTTFDEAAWIQTLSRTLVMDELITKHSAIMDKYDPAKKVAL
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VVDEWGTWYAPLPGTNPGFLQQQNSLRDALVASLNFDIFSQHAERVRMANIAQMVNVLQA
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MILTDGDKMVLTPTYHVFALYKPYQDATHLPLQLQTPQYRHGDTQVPAVHGSAVKAKDGH
HHHCCCCCEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCEEEECCCE
VYIALTNLDASASATVSVQVEGLPLRAVEGQILTAPAIATYNTYAQPQAVAPVAFKGARV
EEEEEEECCCCCCEEEEEEECCCEEEEECCEEEECCEEEECCCCCCCCCCCCEEECCCEE
QGKTVNVALPAHSIVMLKLQ
ECCEEEEEECCCEEEEEEEC
>Mature Secondary Structure 
PASFAAEVKVNGTLRVDQPGAQVSRQLFGQFAEHLGTGIYGGVWVGEESPIPNTHGYRN
CCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHH
DVVAALKAIAVPNIRWPGGCFADEYHWRDGVGTPAKRPIRVNTHWGGVEESNRFGTHEFM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH
DFTELLGTQAYIAGNVGDAAPEEIAQWAEYMTAPTRSSLANERRANGRDAPWQVPYFGVG
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCEEECC
NELWGCGGNMRVEYAADVFRRYQTFVKSPASQKILKIAPGPSDDDYHWTEVMMREASKFM
CCEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DGLSMHYYTIPGGWPPRASSTTFDEAAWIQTLSRTLVMDELITKHSAIMDKYDPAKKVAL
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VVDEWGTWYAPLPGTNPGFLQQQNSLRDALVASLNFDIFSQHAERVRMANIAQMVNVLQA
EEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MILTDGDKMVLTPTYHVFALYKPYQDATHLPLQLQTPQYRHGDTQVPAVHGSAVKAKDGH
HHHCCCCCEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCEEEECCCE
VYIALTNLDASASATVSVQVEGLPLRAVEGQILTAPAIATYNTYAQPQAVAPVAFKGARV
EEEEEEECCCCCCEEEEEEECCCEEEEECCEEEECCEEEECCCCCCCCCCCCEEECCCEE
QGKTVNVALPAHSIVMLKLQ
ECCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA