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The map label for this gene is lamA [H]

Identifier: 21242038

GI number: 21242038

Start: 1471689

End: 1473065

Strand: Reverse

Name: lamA [H]

Synonym: XAC1285

Alternate gene names: 21242038

Gene position: 1473065-1471689 (Counterclockwise)

Preceding gene: 21242039

Following gene: 21242035

Centisome position: 28.46

GC content: 61.07

Gene sequence:

>1377_bases
TTGATTCCGTACCAGGAGAGGCTCGCAATGAACACACTACGCGCTGTGACTGTGCAGTTCGCTGTTCTGCTTGGCGTCGC
GCTTACAACGAGCGCGAGTGCGCAGACGCTGGTATGGGAAGACAACTTCAACGGGCCTTCCATCGACGGCACCAAATGGA
CCTACGACGTCGGCAACGGATGCCAGATCGGCTTGTGCGGCTGGGGCAACGGCGAGATGCAGTACTACACCAGCCGCACC
GAGAATGCGCGGATCGAAAACGGCAGGTTGGTGGTCGAAGCACGCCGCGAAGCCTTCGGCGGCATGCCGTTCACTTCAGC
ACGGCTCAAGACCGAGGGCCGCATGCACTTCACGTACGGCACGCTGGAGGCGCGCATCAAAACGCCGGTGGTGGGCAACG
GTTTGTGGCCGGCGTACTGGATGCTCGGCACCATCGGCGTGTGGCCGGGTCGCGGCGAAATCGACCTCATGGAAGCCGGC
ATGGCCGCCGCGATCGCCAATGGCACCGCGAACCGTCGCATCGGCGCGGCGGTGCACTGGGACTACAACGGGTCGCAGGC
CGATTACGACACCAGCTACACCAACCCGGTGAATCTGCATGACGATTTTCATGTGTACCGATTGACCTGGGACCCGCAAT
TCATCCGCGTCTCGATCGACGGGCAGCAATACTTCGAATTTGCGATTCCCAATATCGAAGGCGCTTCCTTGCATGAATTC
CATCAGCAGCAGTATCTGTTGCTCAACCTGGCGGTGGGCGGCACCTTCACTGGTGTGACCTCGCCTGCTGCGGTGACGGC
CCCGCTCCCTGGCAAAATGGAGGTCGATTACATCCGCCTGTATCAGAACCCAGGGTCGCAGTTGTACGTGGGCACGCAAC
ATGCCGTGCCCGCGGGCCGGTTCGGGGTGTTTACCGAACAGACCGATACCAGTGCACGGCTGACCTTCGGCCAGGATGCC
GAGTTGTATCTGTGGAACAATCTCACCCCGATTGCGCAGGCGCCTTTCGAGGGCGGCAGTGTCATGGCCTACCGCGCCAA
CGCCGGGGCATGGTTTGGATTGGGCATCCAGAGCGACTACCGCAATCTCGCTGCATATGCCGGCGGTGCATTGAAACTGC
ACGTCAAGACCACCACGCCGTCGACATTCAAGATCGGCATCAACACCAGCTTCGGCGATAGCTGGGTGGATTTTGTCGCT
GGCGGCAACCAGTACGGACTGGTGCGCGATGGCGCCTGGCACGAGGTGAGCATCCCGTTCAGCGCCTTCTACGATCTGGA
TCTGCAGGCGGTCAAACAGCCCTTCACGCTGGTGGCCGATCCACCGGCTGCACCGGTGGAGATCGCCATCGACAAGGTGT
ACTACCAGAGCCGTTGA

Upstream 100 bases:

>100_bases
ATGATTGATTATTCCGGAATGAACACCACGAATCTGAAGCACGCACGACATTTTCTTTGACACCCAGGCAGCCGCTACGC
AGCGTCGCCCCTCCACGGAT

Downstream 100 bases:

>100_bases
GGCCGCACGCCCAGCCAACGTCTACGCGTTGGCTGGGGTGGCCTTGAGCATGTCGATGAGTTGACGCAGGCGGTACGGTT
TGGGCAGGAAATCGACCTGC

Product: endo-1,3-beta-glucanase

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MIPYQERLAMNTLRAVTVQFAVLLGVALTTSASAQTLVWEDNFNGPSIDGTKWTYDVGNGCQIGLCGWGNGEMQYYTSRT
ENARIENGRLVVEARREAFGGMPFTSARLKTEGRMHFTYGTLEARIKTPVVGNGLWPAYWMLGTIGVWPGRGEIDLMEAG
MAAAIANGTANRRIGAAVHWDYNGSQADYDTSYTNPVNLHDDFHVYRLTWDPQFIRVSIDGQQYFEFAIPNIEGASLHEF
HQQQYLLLNLAVGGTFTGVTSPAAVTAPLPGKMEVDYIRLYQNPGSQLYVGTQHAVPAGRFGVFTEQTDTSARLTFGQDA
ELYLWNNLTPIAQAPFEGGSVMAYRANAGAWFGLGIQSDYRNLAAYAGGALKLHVKTTTPSTFKIGINTSFGDSWVDFVA
GGNQYGLVRDGAWHEVSIPFSAFYDLDLQAVKQPFTLVADPPAAPVEIAIDKVYYQSR

Sequences:

>Translated_458_residues
MIPYQERLAMNTLRAVTVQFAVLLGVALTTSASAQTLVWEDNFNGPSIDGTKWTYDVGNGCQIGLCGWGNGEMQYYTSRT
ENARIENGRLVVEARREAFGGMPFTSARLKTEGRMHFTYGTLEARIKTPVVGNGLWPAYWMLGTIGVWPGRGEIDLMEAG
MAAAIANGTANRRIGAAVHWDYNGSQADYDTSYTNPVNLHDDFHVYRLTWDPQFIRVSIDGQQYFEFAIPNIEGASLHEF
HQQQYLLLNLAVGGTFTGVTSPAAVTAPLPGKMEVDYIRLYQNPGSQLYVGTQHAVPAGRFGVFTEQTDTSARLTFGQDA
ELYLWNNLTPIAQAPFEGGSVMAYRANAGAWFGLGIQSDYRNLAAYAGGALKLHVKTTTPSTFKIGINTSFGDSWVDFVA
GGNQYGLVRDGAWHEVSIPFSAFYDLDLQAVKQPFTLVADPPAAPVEIAIDKVYYQSR
>Mature_458_residues
MIPYQERLAMNTLRAVTVQFAVLLGVALTTSASAQTLVWEDNFNGPSIDGTKWTYDVGNGCQIGLCGWGNGEMQYYTSRT
ENARIENGRLVVEARREAFGGMPFTSARLKTEGRMHFTYGTLEARIKTPVVGNGLWPAYWMLGTIGVWPGRGEIDLMEAG
MAAAIANGTANRRIGAAVHWDYNGSQADYDTSYTNPVNLHDDFHVYRLTWDPQFIRVSIDGQQYFEFAIPNIEGASLHEF
HQQQYLLLNLAVGGTFTGVTSPAAVTAPLPGKMEVDYIRLYQNPGSQLYVGTQHAVPAGRFGVFTEQTDTSARLTFGQDA
ELYLWNNLTPIAQAPFEGGSVMAYRANAGAWFGLGIQSDYRNLAAYAGGALKLHVKTTTPSTFKIGINTSFGDSWVDFVA
GGNQYGLVRDGAWHEVSIPFSAFYDLDLQAVKQPFTLVADPPAAPVEIAIDKVYYQSR

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 50305; Mature: 50305

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYQERLAMNTLRAVTVQFAVLLGVALTTSASAQTLVWEDNFNGPSIDGTKWTYDVGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEEEEECCCC
CQIGLCGWGNGEMQYYTSRTENARIENGRLVVEARREAFGGMPFTSARLKTEGRMHFTYG
CEEEEEECCCCCEEEEECCCCCCEEECCEEEEEEHHHHHCCCCCCCCEEECCCEEEEEEE
TLEARIKTPVVGNGLWPAYWMLGTIGVWPGRGEIDLMEAGMAAAIANGTANRRIGAAVHW
EEEEEEECCEECCCCCHHHHHHHHEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEE
DYNGSQADYDTSYTNPVNLHDDFHVYRLTWDPQFIRVSIDGQQYFEFAIPNIEGASLHEF
CCCCCCCCCCCCCCCCEECCCCEEEEEEEECCEEEEEEECCCEEEEEECCCCCCCCHHHH
HQQQYLLLNLAVGGTFTGVTSPAAVTAPLPGKMEVDYIRLYQNPGSQLYVGTQHAVPAGR
HCCEEEEEEEEECCEECCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCC
FGVFTEQTDTSARLTFGQDAELYLWNNLTPIAQAPFEGGSVMAYRANAGAWFGLGIQSDY
EEEEECCCCCCEEEEECCCCEEEEECCCCCHHCCCCCCCCEEEEEECCCEEEEECCCHHH
RNLAAYAGGALKLHVKTTTPSTFKIGINTSFGDSWVDFVAGGNQYGLVRDGAWHEVSIPF
HHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEECCH
SAFYDLDLQAVKQPFTLVADPPAAPVEIAIDKVYYQSR
HEEECCCHHHHCCCEEEEECCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MIPYQERLAMNTLRAVTVQFAVLLGVALTTSASAQTLVWEDNFNGPSIDGTKWTYDVGNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEEEEECCCC
CQIGLCGWGNGEMQYYTSRTENARIENGRLVVEARREAFGGMPFTSARLKTEGRMHFTYG
CEEEEEECCCCCEEEEECCCCCCEEECCEEEEEEHHHHHCCCCCCCCEEECCCEEEEEEE
TLEARIKTPVVGNGLWPAYWMLGTIGVWPGRGEIDLMEAGMAAAIANGTANRRIGAAVHW
EEEEEEECCEECCCCCHHHHHHHHEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEE
DYNGSQADYDTSYTNPVNLHDDFHVYRLTWDPQFIRVSIDGQQYFEFAIPNIEGASLHEF
CCCCCCCCCCCCCCCCEECCCCEEEEEEEECCEEEEEEECCCEEEEEECCCCCCCCHHHH
HQQQYLLLNLAVGGTFTGVTSPAAVTAPLPGKMEVDYIRLYQNPGSQLYVGTQHAVPAGR
HCCEEEEEEEEECCEECCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCC
FGVFTEQTDTSARLTFGQDAELYLWNNLTPIAQAPFEGGSVMAYRANAGAWFGLGIQSDY
EEEEECCCCCCEEEEECCCCEEEEECCCCCHHCCCCCCCCEEEEEECCCEEEEECCCHHH
RNLAAYAGGALKLHVKTTTPSTFKIGINTSFGDSWVDFVAGGNQYGLVRDGAWHEVSIPF
HHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEECCH
SAFYDLDLQAVKQPFTLVADPPAAPVEIAIDKVYYQSR
HEEECCCHHHHCCCEEEEECCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]