Click here to switch to the map view.

The map label for this gene is ybaA [H]

Identifier: 21242031

GI number: 21242031

Start: 1463548

End: 1463913

Strand: Reverse

Name: ybaA [H]

Synonym: XAC1278

Alternate gene names: 21242031

Gene position: 1463913-1463548 (Counterclockwise)

Preceding gene: 21242032

Following gene: 21242030

Centisome position: 28.29

GC content: 59.84

Gene sequence:

>366_bases
ATGTCGTATATCGATGGTTTCGTGCTTGCCGTCCCCACGGCCAACAAAGAAGCCTTTATCGCGCATGCCCGCATGGGCGA
TGCGGTCATCATGGAGTACGGTGCCCTGCGGGTGGTGGAGTGTTGGGGTGACGATGTCCAAGCGGGGCAATGGACCGACT
TCTATCGCGCAGTGGATGCCACCGCCGAAGAGACCGTGGTGTTTTCCTGGATCGAATGGCCGGACAAGGCCACCCGGGAT
GAAGGCATGCGCAAGATGATGGAAGACCCACGCATGGACCCGTCGGTCAATCCGATGCCGTTCGATGGCAAGCGCATGGT
CTACGGTGGCTTCGTACCGATCGTGGCGCTGGGTCAATCGGCTTGA

Upstream 100 bases:

>100_bases
CACGCTCCTGCCCCACTGCTCTCCAGTTGTTGGTCGCACCAAATATCCCTTCTTGGTCATCCTCACGTGCACGCCGTGCA
GCCCATCTGCGGAGGTGGTT

Downstream 100 bases:

>100_bases
GCGATGCAGCGCGCGATGGCCCCGCGGGACGTTGATCAGGCATGCGCAGGCTGGTACTGCCGCTGCGTTCGGCACGGAAT
CGTTTGTGGTGATCGCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQAGQWTDFYRAVDATAEETVVFSWIEWPDKATRD
EGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQSA

Sequences:

>Translated_121_residues
MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQAGQWTDFYRAVDATAEETVVFSWIEWPDKATRD
EGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQSA
>Mature_120_residues
SYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQAGQWTDFYRAVDATAEETVVFSWIEWPDKATRDE
GMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQSA

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=115, Percent_Identity=53.9130434782609, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 13531; Mature: 13399

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQAGQWTDFYRAVDA
CCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCC
TAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQS
CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCC
A
C
>Mature Secondary Structure 
SYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGALRVVECWGDDVQAGQWTDFYRAVDA
CCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCC
TAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQS
CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]