| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is tesB [H]
Identifier: 21241997
GI number: 21241997
Start: 1419479
End: 1420384
Strand: Reverse
Name: tesB [H]
Synonym: XAC1243
Alternate gene names: 21241997
Gene position: 1420384-1419479 (Counterclockwise)
Preceding gene: 21241998
Following gene: 21241996
Centisome position: 27.44
GC content: 65.34
Gene sequence:
>906_bases TTGTCCGCCACCGCCGAACCCGTCGTCTCCGAACTGATCAGCCTGCTGTCGCTGGAGCGCCTGGAAGACAACCTGTTCCG TGGCCAGAGCCGCGACATCGGCACCAAATACGTGTTCGGTGGGCAGGTGCTGGGCCAGGCGTTGGCGGCAGCGCAGGCGA CGGTGGAAAACGGCCGCCAGGCGCATTCGCTGCATGCGTATTTCCTGCGTGCCGGCAATATCGACCACCCCATCGTCTAC GACGTCGACCGCACCCGCGATGGCGGCAGTTTCTCGGTGCGCCGGGTCACCGCGATCCAGCACGGCAAGGTGATCTTTTT TTGCGCGGCCTCGTTTCAGGAGCACGAAGAAGGCGCCGAGCATCAGTCGGCGATGCCGGTGGTGCCGCCACCGGAAGACA TCGAACCGGCCGCACCGCTGGCACCGGACGTGTTGGCCAAGCTGCCGGCCAAGGTGCAGCGTTGGCTGTCGCGCGGTGGC CCGTTCGAGTTTCGCCATGTCTTTCCGCGCGACGAACTCAGGCCGCCCAAGCGCCCGCCGTTCCAGCAGATGTGGCTGCG CTTGAACGATCCCATCGGAGACGATGTGGGCCTGCATCAAGCGCTCCTTGCGTACGCGTCGGATTTTCAGTTGCTGGGCA CCTCGACATTTCCGCACGGCATCAGCTATTACACGCCGAACGTGCAGATGGCCTCGCTCGATCATGCCCTGTGGTTCCAT CGTCCATTCCGTACCGACGACTGGCTGCTGTACTCGCTCGACAGCCCCACCGCGCAGGGCGCGCGCGGTCTGGCTCGCGG GCAGTTTTTCACCCGCGACGGCGTGCTGGTGGCCAGCACCACGCAGGAAGGCCTGATCCGGGTGGTGCCTGACGGCAGCG CGATTGCCGTGCCGGCCAAGGAATAG
Upstream 100 bases:
>100_bases GGCCTGGTGGCGCGCCTGCAAAAGGCCTGAGCCCTGCCGTCGCGGCGCCCCTCGGGCGGGCCGGTATACTCGCTGTCCGT CGCATGCCCAGGCCAGCCTC
Downstream 100 bases:
>100_bases ATCTCACATCGCGACAGCACGGCACCCCGCTTGATGGCCAGTGCGCACTCTGGCTGGGTGAAGGCAGCCGAGCACCGCTT CCCGCGCACTGCAGACACCG
Product: acyl-CoA thiolesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSATAEPVVSELISLLSLERLEDNLFRGQSRDIGTKYVFGGQVLGQALAAAQATVENGRQAHSLHAYFLRAGNIDHPIVY DVDRTRDGGSFSVRRVTAIQHGKVIFFCAASFQEHEEGAEHQSAMPVVPPPEDIEPAAPLAPDVLAKLPAKVQRWLSRGG PFEFRHVFPRDELRPPKRPPFQQMWLRLNDPIGDDVGLHQALLAYASDFQLLGTSTFPHGISYYTPNVQMASLDHALWFH RPFRTDDWLLYSLDSPTAQGARGLARGQFFTRDGVLVASTTQEGLIRVVPDGSAIAVPAKE
Sequences:
>Translated_301_residues MSATAEPVVSELISLLSLERLEDNLFRGQSRDIGTKYVFGGQVLGQALAAAQATVENGRQAHSLHAYFLRAGNIDHPIVY DVDRTRDGGSFSVRRVTAIQHGKVIFFCAASFQEHEEGAEHQSAMPVVPPPEDIEPAAPLAPDVLAKLPAKVQRWLSRGG PFEFRHVFPRDELRPPKRPPFQQMWLRLNDPIGDDVGLHQALLAYASDFQLLGTSTFPHGISYYTPNVQMASLDHALWFH RPFRTDDWLLYSLDSPTAQGARGLARGQFFTRDGVLVASTTQEGLIRVVPDGSAIAVPAKE >Mature_300_residues SATAEPVVSELISLLSLERLEDNLFRGQSRDIGTKYVFGGQVLGQALAAAQATVENGRQAHSLHAYFLRAGNIDHPIVYD VDRTRDGGSFSVRRVTAIQHGKVIFFCAASFQEHEEGAEHQSAMPVVPPPEDIEPAAPLAPDVLAKLPAKVQRWLSRGGP FEFRHVFPRDELRPPKRPPFQQMWLRLNDPIGDDVGLHQALLAYASDFQLLGTSTFPHGISYYTPNVQMASLDHALWFHR PFRTDDWLLYSLDSPTAQGARGLARGQFFTRDGVLVASTTQEGLIRVVPDGSAIAVPAKE
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=290, Percent_Identity=42.4137931034483, Blast_Score=233, Evalue=1e-61, Organism=Escherichia coli, GI1786657, Length=269, Percent_Identity=49.0706319702602, Blast_Score=270, Evalue=7e-74, Organism=Caenorhabditis elegans, GI71988741, Length=290, Percent_Identity=40, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17558508, Length=335, Percent_Identity=37.910447761194, Blast_Score=189, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17531889, Length=278, Percent_Identity=35.2517985611511, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI115532456, Length=278, Percent_Identity=35.2517985611511, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17531885, Length=278, Percent_Identity=35.2517985611511, Blast_Score=158, Evalue=3e-39, Organism=Caenorhabditis elegans, GI71982224, Length=299, Percent_Identity=32.1070234113712, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI212645202, Length=269, Percent_Identity=31.5985130111524, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322480, Length=307, Percent_Identity=26.7100977198697, Blast_Score=99, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 33231; Mature: 33100
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATAEPVVSELISLLSLERLEDNLFRGQSRDIGTKYVFGGQVLGQALAAAQATVENGRQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCH AHSLHAYFLRAGNIDHPIVYDVDRTRDGGSFSVRRVTAIQHGKVIFFCAASFQEHEEGAE HHHHEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHCHH HQSAMPVVPPPEDIEPAAPLAPDVLAKLPAKVQRWLSRGGPFEFRHVFPRDELRPPKRPP HHCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCC FQQMWLRLNDPIGDDVGLHQALLAYASDFQLLGTSTFPHGISYYTPNVQMASLDHALWFH HHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEECCCHHHHHC RPFRTDDWLLYSLDSPTAQGARGLARGQFFTRDGVLVASTTQEGLIRVVPDGSAIAVPAK CCCCCCCEEEEECCCCCHHHHHHHHCCCEEECCCEEEEECCCCCEEEEECCCCEEEECCC E C >Mature Secondary Structure SATAEPVVSELISLLSLERLEDNLFRGQSRDIGTKYVFGGQVLGQALAAAQATVENGRQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCH AHSLHAYFLRAGNIDHPIVYDVDRTRDGGSFSVRRVTAIQHGKVIFFCAASFQEHEEGAE HHHHEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHCHH HQSAMPVVPPPEDIEPAAPLAPDVLAKLPAKVQRWLSRGGPFEFRHVFPRDELRPPKRPP HHCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCC FQQMWLRLNDPIGDDVGLHQALLAYASDFQLLGTSTFPHGISYYTPNVQMASLDHALWFH HHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEEEECCCHHHHHC RPFRTDDWLLYSLDSPTAQGARGLARGQFFTRDGVLVASTTQEGLIRVVPDGSAIAVPAK CCCCCCCEEEEECCCCCHHHHHHHHCCCEEECCCEEEEECCCCCEEEEECCCCEEEECCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]