| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241973
Identifier: 21241973
GI number: 21241973
Start: 1398245
End: 1399009
Strand: Reverse
Name: 21241973
Synonym: XAC1219
Alternate gene names: NA
Gene position: 1399009-1398245 (Counterclockwise)
Preceding gene: 77748570
Following gene: 21241972
Centisome position: 27.03
GC content: 63.53
Gene sequence:
>765_bases ATGACAACGCTTCCCATCCGTGCGCCGACCGTGGCGCATACCGCCAGCGGCATGCAGACGCACTTCCTTGTGCGCCATCT GTGGCTGCCCCTGGCCTGCGTTCTGTTGGCGAGCGCGCTGCTGATGGGCGCCGGTGGCGACCAATGGGTTGCCGATACGC TGTATCGGCTGGAAGGCGGGCACTGGCTACTCAAGGACCACTGGTTCACCAGTGGCGTGATCCACCGCGTGGGTAAATGG TTGAGCACGGCAGCCGGAGTCGGCGTGCTGGTGCTGGCCATTGTTGCGTGGTGCAGGCCACGCCTGAAGGTGTTGTGCTG GCCGCTGACCTACCTGGCCGCCTCTATCGCACTGTCGACCTCGCTGGTGTCGCTGCTCAAGTCGTGGACGGCGATGGACT GCCCGTGGGATCTGAGCCGCTATGGCGGTACGCAAGCGATGATCGGGCTATTCGAATCGCGCCACGGTATTGCCGCGTCC GGTTGCTTTCCCGCCGGCCATGCCAGTGCCGGCTATGCGTGGGTGGCGCTGTATTTTTGTGCGCTGGCGCTCCGTCCTGC ATGGCGGTCTGCAGGTTTGTTCATAGGCTTGGCAGCAGGTCTCATTTTCGGTGTTGCGCAACAACTGCGCGGCGCGCATT TTCTCTCGCACGACCTGTGGTCGCTGGCGGTGTGCTGGGTGAGCGCACTGGCGCTGTACTGCGTGATGCTGCAAAAGCCG CGTCGCGCGCTTGGATTGATGTTGCCCTTGGGGGATGCAGCATGA
Upstream 100 bases:
>100_bases AACGCTTGGTGTCGGGTTAACGGCCGAGCAACCCCGGTCCGACCGCTTTCCGACATCCGGGTTTCGAAGATGTCGGGCAT TGACACAGGCCGCCATCTCG
Downstream 100 bases:
>100_bases GTACCTGGTTGCCGGAACCGCGCAAGCGTAGTGGCCTGCGCGCGCTGACATGGAGTACGCGGCCGACGGTGTCGACCGAA GCGCTGGTGCTGCTGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: PAP2 Family Protein; Phosphoesterase PA-Phosphatase ; PAP2 Superfamily Protein-Like Protein; Phosphoesterase; Transmembrane Protein; PAP2 Superfamily; Pap2 Superfamily Protein-Like Protein; Phosphoesterase PA-Phosphatase-Like; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTTLPIRAPTVAHTASGMQTHFLVRHLWLPLACVLLASALLMGAGGDQWVADTLYRLEGGHWLLKDHWFTSGVIHRVGKW LSTAAGVGVLVLAIVAWCRPRLKVLCWPLTYLAASIALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAAS GCFPAGHASAGYAWVALYFCALALRPAWRSAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQKP RRALGLMLPLGDAA
Sequences:
>Translated_254_residues MTTLPIRAPTVAHTASGMQTHFLVRHLWLPLACVLLASALLMGAGGDQWVADTLYRLEGGHWLLKDHWFTSGVIHRVGKW LSTAAGVGVLVLAIVAWCRPRLKVLCWPLTYLAASIALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAAS GCFPAGHASAGYAWVALYFCALALRPAWRSAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQKP RRALGLMLPLGDAA >Mature_253_residues TTLPIRAPTVAHTASGMQTHFLVRHLWLPLACVLLASALLMGAGGDQWVADTLYRLEGGHWLLKDHWFTSGVIHRVGKWL STAAGVGVLVLAIVAWCRPRLKVLCWPLTYLAASIALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASG CFPAGHASAGYAWVALYFCALALRPAWRSAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQKPR RALGLMLPLGDAA
Specific function: Unknown
COG id: COG3907
COG function: function code R; PAP2 (acid phosphatase) superfamily protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27406; Mature: 27274
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPIRAPTVAHTASGMQTHFLVRHLWLPLACVLLASALLMGAGGDQWVADTLYRLEGG CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC HWLLKDHWFTSGVIHRVGKWLSTAAGVGVLVLAIVAWCRPRLKVLCWPLTYLAASIALST EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH SLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASGCFPAGHASAGYAWVALYFC HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHH ALALRPAWRSAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRALGLMLPLGDAA HHHHHEECCCCCCC >Mature Secondary Structure TTLPIRAPTVAHTASGMQTHFLVRHLWLPLACVLLASALLMGAGGDQWVADTLYRLEGG CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC HWLLKDHWFTSGVIHRVGKWLSTAAGVGVLVLAIVAWCRPRLKVLCWPLTYLAASIALST EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH SLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASGCFPAGHASAGYAWVALYFC HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHH ALALRPAWRSAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRALGLMLPLGDAA HHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA