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The map label for this gene is yxnA [H]

Identifier: 21241934

GI number: 21241934

Start: 1345167

End: 1346159

Strand: Reverse

Name: yxnA [H]

Synonym: XAC1180

Alternate gene names: 21241934

Gene position: 1346159-1345167 (Counterclockwise)

Preceding gene: 21241938

Following gene: 21241933

Centisome position: 26.01

GC content: 66.26

Gene sequence:

>993_bases
GTGGAGACATCCCATGCATCGCACCCCTCCTGCCCACGTGGTGATTTCCGGCGCGTCCAGCGGCATCGGCCAAGCCACTG
CAGAAGCATTCGCCGAACAAGGCGCGCGCCTGGTGCTGGCCGCACGCGCGAAGACGCCCTCGATGCGGTTGCCGAACGCT
GCCGTGCGCGAGGTGCCGAGGTCTTGGTGGTGCCCACCGACGTCAAACATGCCGAACAGGTCGAGGCACTGGCGACCAGC
GCGCAGAGTTTTCTGGGGCGCATCGACCTGTGGTTCGGCAATGTCGGGGTGGGCGCAGTCGGCAAATTCCATGAGGTACC
GATGGAAGCGAGCGCGGCCGTGATCCACGCCAACCTGCTCGGTCGCATGCACGACGCCCATGCGGTGATCCCCATCTTCG
TCGATCAAGGCCACGGCATCTTCGTCAACATGATCTCGTCGGGCGGCTTTGCATCCACGCCATTTGCGGCGGCGTACGGC
GCCAGCAAATTCGGGCAACGCGGCTTTTCCGAAGCATTGCGCGCCGAGTTGAGCGACTACCCGCACATCCACGTGTGCGA
CGTGTACCCGTACTTCGTGGATACGCCGGGCCTGCGCCATGGTGCCAATTACGTGGGCCGCCGCATCAGCGGGCCACCGC
TGATGCTGGACACCCGCACCGTCGCGGCAGCTGTCGTGCGCCTGCTGGACCGGCCACGCAACACGGTGGTGTTGGGCACT
GCCGTCCATGCGATGCGCCTAGGCCATGCGCTGGCGCCGCAGGCCCTGGCACGCGCCATGTACCGCTTCTTCGAGCGTTA
TTTTGCGCAGGCACCCCGGGTGGCGCGTTCCACCGGCAATGTGTTCGCAGCACCCAGCATTGCCGGCGGCATCGACGGTG
GCTACCGGCGGCGCCCCAGGTTGCGCGCACGTTCTACGCGCGACAAGGTGTTGATCGGTGCGGCCGCTGCAGCAGTGACG
GGCTTGGCGGTGCTGGCTTTACGACGCAGGTGA

Upstream 100 bases:

>100_bases
TCACGCATGGCGCCAGCCCGACCAGTTCAGCTTCACGCTGCGGTACGCAAAGCGCCGCACCGTGTTCACGCACGGCGATC
AAGCATGCCTGCTCGTTCTT

Downstream 100 bases:

>100_bases
GTCCCCGAGGTCCGCGTTTGCGGTGGCGACAGTGGCGCGCTCTTGCCAGCGATTTCCAGACGCTGCGGCAAGGTGGGAAG
CAGACCGGCCTCAATGCGAC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
METSHASHPSCPRGDFRRVQRHRPSHCRSIRRTRRAPGAGRTREDALDAVAERCRARGAEVLVVPTDVKHAEQVEALATS
AQSFLGRIDLWFGNVGVGAVGKFHEVPMEASAAVIHANLLGRMHDAHAVIPIFVDQGHGIFVNMISSGGFASTPFAAAYG
ASKFGQRGFSEALRAELSDYPHIHVCDVYPYFVDTPGLRHGANYVGRRISGPPLMLDTRTVAAAVVRLLDRPRNTVVLGT
AVHAMRLGHALAPQALARAMYRFFERYFAQAPRVARSTGNVFAAPSIAGGIDGGYRRRPRLRARSTRDKVLIGAAAAAVT
GLAVLALRRR

Sequences:

>Translated_330_residues
METSHASHPSCPRGDFRRVQRHRPSHCRSIRRTRRAPGAGRTREDALDAVAERCRARGAEVLVVPTDVKHAEQVEALATS
AQSFLGRIDLWFGNVGVGAVGKFHEVPMEASAAVIHANLLGRMHDAHAVIPIFVDQGHGIFVNMISSGGFASTPFAAAYG
ASKFGQRGFSEALRAELSDYPHIHVCDVYPYFVDTPGLRHGANYVGRRISGPPLMLDTRTVAAAVVRLLDRPRNTVVLGT
AVHAMRLGHALAPQALARAMYRFFERYFAQAPRVARSTGNVFAAPSIAGGIDGGYRRRPRLRARSTRDKVLIGAAAAAVT
GLAVLALRRR
>Mature_330_residues
METSHASHPSCPRGDFRRVQRHRPSHCRSIRRTRRAPGAGRTREDALDAVAERCRARGAEVLVVPTDVKHAEQVEALATS
AQSFLGRIDLWFGNVGVGAVGKFHEVPMEASAAVIHANLLGRMHDAHAVIPIFVDQGHGIFVNMISSGGFASTPFAAAYG
ASKFGQRGFSEALRAELSDYPHIHVCDVYPYFVDTPGLRHGANYVGRRISGPPLMLDTRTVAAAVVRLLDRPRNTVVLGT
AVHAMRLGHALAPQALARAMYRFFERYFAQAPRVARSTGNVFAAPSIAGGIDGGYRRRPRLRARSTRDKVLIGAAAAAVT
GLAVLALRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706318, Length=148, Percent_Identity=30.4054054054054, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4503817, Length=139, Percent_Identity=32.3741007194245, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35794; Mature: 35794

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSHASHPSCPRGDFRRVQRHRPSHCRSIRRTRRAPGAGRTREDALDAVAERCRARGAE
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCE
VLVVPTDVKHAEQVEALATSAQSFLGRIDLWFGNVGVGAVGKFHEVPMEASAAVIHANLL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCHHHHHHHHHHH
GRMHDAHAVIPIFVDQGHGIFVNMISSGGFASTPFAAAYGASKFGQRGFSEALRAELSDY
HHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCC
PHIHVCDVYPYFVDTPGLRHGANYVGRRISGPPLMLDTRTVAAAVVRLLDRPRNTVVLGT
CCEEEEECCCCCCCCCCCHHCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEHH
AVHAMRLGHALAPQALARAMYRFFERYFAQAPRVARSTGNVFAAPSIAGGIDGGYRRRPR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCCCCCCCCCCC
LRARSTRDKVLIGAAAAAVTGLAVLALRRR
HHHCCCCCCEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METSHASHPSCPRGDFRRVQRHRPSHCRSIRRTRRAPGAGRTREDALDAVAERCRARGAE
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCE
VLVVPTDVKHAEQVEALATSAQSFLGRIDLWFGNVGVGAVGKFHEVPMEASAAVIHANLL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCCHHHHHHHHHHH
GRMHDAHAVIPIFVDQGHGIFVNMISSGGFASTPFAAAYGASKFGQRGFSEALRAELSDY
HHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCC
PHIHVCDVYPYFVDTPGLRHGANYVGRRISGPPLMLDTRTVAAAVVRLLDRPRNTVVLGT
CCEEEEECCCCCCCCCCCHHCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEHH
AVHAMRLGHALAPQALARAMYRFFERYFAQAPRVARSTGNVFAAPSIAGGIDGGYRRRPR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCCCCCCCCCCC
LRARSTRDKVLIGAAAAAVTGLAVLALRRR
HHHCCCCCCEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]