| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241933
Identifier: 21241933
GI number: 21241933
Start: 1342538
End: 1344892
Strand: Reverse
Name: 21241933
Synonym: XAC1179
Alternate gene names: NA
Gene position: 1344892-1342538 (Counterclockwise)
Preceding gene: 21241934
Following gene: 21241932
Centisome position: 25.99
GC content: 64.84
Gene sequence:
>2355_bases ATGCCGTCTCGCTTGATCGTCCCACGTCGGGCTCGTTGGCTGGCAGCGCTTGCCGCCGTCATCGCTGTTTTCGGCAACGC TGCGCCGCGCACGCCTGCAATTGCCTTCGACGCAGTCGACCCGTTCATTGGCACCGGTGGCGAAGGCCATACCTATCCTG GTGCCACGGTGCCGTTCGGCATGGTGCAGCTGAGCCCGGATACGCAAATCAAGCCGCGCAAGGACGCCTATGGCTGGGCG GCCGGCTACCGGCATAGCGACACCACCATCGTCGGGTTCTCGCACACGCATTTTTCCGGTTCCGGGCATTCGGATCTGGG CGACATCCTGCTGATGCCGCAAGCTGGCGACATCAAACTCGAACGCGGGGATGCCAGCAAGCCGGGCAGCGGCTATACCG CGCAGTTCGACCACACCAGCGAACAGGCGCAGCCCGGCTATTACGCCGTGACCTTGAACGACCGCAACATCCGCGCCGAA CTCACTGCCAGCGCGCGTGTGGGCGTGCATCGCTATCGGTTCCCGGAAGGCACGCCGGCGCATGTGCTGGTCGACCTGCG CACCAGCCTGTACGACTACCCTGGCAAGGTGCAGTGGTCGCGGCTGCGTGTGCGCAGCGATGGCACGGTGACCGGCTTTC GCGAAACACGCGGTTGGGCGCCCGGCCGGCAGCTGTATTTCGCCATGCGTTTCTCGCGCCCGCTCACTGCCACGCAACTC CATGACACCGAACAGGACATCCCGTACAAGGGCTTTCCACCGCCGGGCGAGAAGAATCCTGCGCAGCGCGCGCAGATCGA AGGCCGGCAACTGGTCGGTGTGTTCGATGTCGCCAACGACGGCACACCGCTGGTGGTGAAGGTGGCGCTCTCGCCGGTCA GCGAGGCCGGTGCCATCGCCAACCTCGATGCCGAAGTGCCTGGCTTCGATTTCGATCGCGTCCGCGCCGATGCACGCGCG CAATGGACGCAGGCGCTGTCGGCGATCGATGCACAGGGCACCCCGCAACAACGCACCCAGCTCTATACCGCGCTGTATCA CACCCTGCTCGGGCCGACGCTGTTCATGGACAGCGACGGCCGCTACCGCGGGCCAGACAACGCGGTGCATCAAGCGACTG GCTGGACCAACTATTCCACCTTCTCGCTGTGGGATACCTACCGCGCCTTGCATCCGCTGCTCACCCTGGTGCAGCCGGCG CAACGCAGCAGCGATGTGGTCAATTCGCTGCTCGCCTCGCGTCGCGAAAGCGCCTACGGCATCCTGCCGATATGGGCATT CCACGGCCTGGAAACCTGGTGCATGATCGGCTACCACGCCGTCCCGGTGATTGCGGACGCGTACATGAAAGGCATCGGCG GCTTCGACCCAGATGAGGCCTTGCAAGCGATGGTCGCCAGCGCCAACTACGGCCCTTACGACGGCATCGCGCAGTATCGC GAGCTGGGCTATGTGCCCATCGACGAAGAAGGCGAAGCCGCATCCAAGACGCTGGAATACGCCTTCGACGACTGGACCAT CGCGCGCATGGCCGACAGGCTCGGCAAGGCCGAGATTGCCGCCGAGTTCACCAAGCGTGCCGGCAACTGGAAGCACGCCT TCGACCCGGCCACCGGCTACATGCGCGCGCGCACCCGCGCCGGCAACTTCCGCGAGCCGTTCGACCCATCTGCCAGCGGC TACGGCAGCGACTACACCGAAGGCAATGCGTGGCAATACTCCTGGTACGTGCCGCAGGACGTGGCCGGCCTGGCTGCCGC GCATGGCGGCGAGGACACATTGCTTGCCCGGCTGGATGCGGTGTTCGATGCCAAGGTGGACCCGAAGGTCTTCGAGCATA TGGAAGACATCACCGGCCTGATCGGCTGGTACGCGCATGGCAACGAACCCAGCCACCACGTTGCCTATCTGTATGCGTAT GCCGGCCAACCGTGGCGCACGCAGGCGCGTCTGACCCAAATCATGCGCAGCCAATATCACGCAGGGCCAGAAGGCCTGGC CGGCAACGACGATCTCGGCCAGATGTCGGCCTGGTACGTGTTCACCACGCTGGGCTTCTACCCGGTGGCGCCTGGCAGCA ACCAGTACATCATCGGCCGCCCCTTCCTGCCGCGCGCCACGCTCAACCTGCCCAATGGCAAACGTTTCTCGATCATCGCC GAAGGCTTGAGCGATGCACGCAGCTACGTGGGCAGCGCCACGCTCAACGGCAAACCGTTGACCCGCGCTTACGTGACACA CGAACAAATCCTGGCCGGCGGCGAACTGCGTTTCCGTATGCGGGCGACACCGAATCAGCAGTGGGCGACCGACCCAGCGC AGCGGCCGTATTCGATGTCGGCGCAGGTGCAATGA
Upstream 100 bases:
>100_bases AACCCAACCATGACGGCGATGGCCATCGCACATCCTCAGGTGTGGCGCGCCCACGCGGCTGTGCTACGGTCCGGCGCTGC ATCCGCCTAGAGCACTCTGC
Downstream 100 bases:
>100_bases ACCAGAGCAACTGCGAGATGGAGCGACCGGGTGATCCTTTAGGGATGCAAGTCCGCAGGACATGAGGTGGATGCGCAGGC TCGACCGGACGCTCGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MPSRLIVPRRARWLAALAAVIAVFGNAAPRTPAIAFDAVDPFIGTGGEGHTYPGATVPFGMVQLSPDTQIKPRKDAYGWA AGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGDIKLERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLNDRNIRAE LTASARVGVHRYRFPEGTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQLYFAMRFSRPLTATQL HDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDAEVPGFDFDRVRADARA QWTQALSAIDAQGTPQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPA QRSSDVVNSLLASRRESAYGILPIWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDPDEALQAMVASANYGPYDGIAQYR ELGYVPIDEEGEAASKTLEYAFDDWTIARMADRLGKAEIAAEFTKRAGNWKHAFDPATGYMRARTRAGNFREPFDPSASG YGSDYTEGNAWQYSWYVPQDVAGLAAAHGGEDTLLARLDAVFDAKVDPKVFEHMEDITGLIGWYAHGNEPSHHVAYLYAY AGQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLPRATLNLPNGKRFSIIA EGLSDARSYVGSATLNGKPLTRAYVTHEQILAGGELRFRMRATPNQQWATDPAQRPYSMSAQVQ
Sequences:
>Translated_784_residues MPSRLIVPRRARWLAALAAVIAVFGNAAPRTPAIAFDAVDPFIGTGGEGHTYPGATVPFGMVQLSPDTQIKPRKDAYGWA AGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGDIKLERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLNDRNIRAE LTASARVGVHRYRFPEGTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQLYFAMRFSRPLTATQL HDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDAEVPGFDFDRVRADARA QWTQALSAIDAQGTPQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPA QRSSDVVNSLLASRRESAYGILPIWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDPDEALQAMVASANYGPYDGIAQYR ELGYVPIDEEGEAASKTLEYAFDDWTIARMADRLGKAEIAAEFTKRAGNWKHAFDPATGYMRARTRAGNFREPFDPSASG YGSDYTEGNAWQYSWYVPQDVAGLAAAHGGEDTLLARLDAVFDAKVDPKVFEHMEDITGLIGWYAHGNEPSHHVAYLYAY AGQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLPRATLNLPNGKRFSIIA EGLSDARSYVGSATLNGKPLTRAYVTHEQILAGGELRFRMRATPNQQWATDPAQRPYSMSAQVQ >Mature_783_residues PSRLIVPRRARWLAALAAVIAVFGNAAPRTPAIAFDAVDPFIGTGGEGHTYPGATVPFGMVQLSPDTQIKPRKDAYGWAA GYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGDIKLERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLNDRNIRAEL TASARVGVHRYRFPEGTPAHVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQLYFAMRFSRPLTATQLH DTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIANLDAEVPGFDFDRVRADARAQ WTQALSAIDAQGTPQQRTQLYTALYHTLLGPTLFMDSDGRYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPAQ RSSDVVNSLLASRRESAYGILPIWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDPDEALQAMVASANYGPYDGIAQYRE LGYVPIDEEGEAASKTLEYAFDDWTIARMADRLGKAEIAAEFTKRAGNWKHAFDPATGYMRARTRAGNFREPFDPSASGY GSDYTEGNAWQYSWYVPQDVAGLAAAHGGEDTLLARLDAVFDAKVDPKVFEHMEDITGLIGWYAHGNEPSHHVAYLYAYA GQPWRTQARLTQIMRSQYHAGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLPRATLNLPNGKRFSIIAE GLSDARSYVGSATLNGKPLTRAYVTHEQILAGGELRFRMRATPNQQWATDPAQRPYSMSAQVQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86196; Mature: 86065
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRLIVPRRARWLAALAAVIAVFGNAAPRTPAIAFDAVDPFIGTGGEGHTYPGATVPFG CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCE MVQLSPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGDIKL EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEE ERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLNDRNIRAELTASARVGVHRYRFPEGTPA ECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEEEECHHCCEEEEECCCCCCC HVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQLYFAMRFSRPLTATQL EEEEEEHHHHHCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCEEEEEEECCCCCCHHHC HDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIA CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCHHCCCEE NLDAEVPGFDFDRVRADARAQWTQALSAIDAQGTPQQRTQLYTALYHTLLGPTLFMDSDG ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCC RYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPAQRSSDVVNSLLASRRESAYG CCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ILPIWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDPDEALQAMVASANYGPYDGIAQYR EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH ELGYVPIDEEGEAASKTLEYAFDDWTIARMADRLGKAEIAAEFTKRAGNWKHAFDPATGY HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCH MRARTRAGNFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGLAAAHGGEDTLLARLDA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHH VFDAKVDPKVFEHMEDITGLIGWYAHGNEPSHHVAYLYAYAGQPWRTQARLTQIMRSQYH HHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC AGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLPRATLNLPNGKRFSIIA CCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEH EGLSDARSYVGSATLNGKPLTRAYVTHEQILAGGELRFRMRATPNQQWATDPAQRPYSMS HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC AQVQ CCCC >Mature Secondary Structure PSRLIVPRRARWLAALAAVIAVFGNAAPRTPAIAFDAVDPFIGTGGEGHTYPGATVPFG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCE MVQLSPDTQIKPRKDAYGWAAGYRHSDTTIVGFSHTHFSGSGHSDLGDILLMPQAGDIKL EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEE ERGDASKPGSGYTAQFDHTSEQAQPGYYAVTLNDRNIRAELTASARVGVHRYRFPEGTPA ECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEEEECHHCCEEEEECCCCCCC HVLVDLRTSLYDYPGKVQWSRLRVRSDGTVTGFRETRGWAPGRQLYFAMRFSRPLTATQL EEEEEEHHHHHCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCEEEEEEECCCCCCHHHC HDTEQDIPYKGFPPPGEKNPAQRAQIEGRQLVGVFDVANDGTPLVVKVALSPVSEAGAIA CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCHHCCCEE NLDAEVPGFDFDRVRADARAQWTQALSAIDAQGTPQQRTQLYTALYHTLLGPTLFMDSDG ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCC RYRGPDNAVHQATGWTNYSTFSLWDTYRALHPLLTLVQPAQRSSDVVNSLLASRRESAYG CCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ILPIWAFHGLETWCMIGYHAVPVIADAYMKGIGGFDPDEALQAMVASANYGPYDGIAQYR EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHH ELGYVPIDEEGEAASKTLEYAFDDWTIARMADRLGKAEIAAEFTKRAGNWKHAFDPATGY HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCH MRARTRAGNFREPFDPSASGYGSDYTEGNAWQYSWYVPQDVAGLAAAHGGEDTLLARLDA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHH VFDAKVDPKVFEHMEDITGLIGWYAHGNEPSHHVAYLYAYAGQPWRTQARLTQIMRSQYH HHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC AGPEGLAGNDDLGQMSAWYVFTTLGFYPVAPGSNQYIIGRPFLPRATLNLPNGKRFSIIA CCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCCCEEEECCCCCCCEEECCCCCEEEEEH EGLSDARSYVGSATLNGKPLTRAYVTHEQILAGGELRFRMRATPNQQWATDPAQRPYSMS HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC AQVQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA