Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 21241931

Identifier: 21241931

GI number: 21241931

Start: 1339401

End: 1341206

Strand: Reverse

Name: 21241931

Synonym: XAC1177

Alternate gene names: NA

Gene position: 1341206-1339401 (Counterclockwise)

Preceding gene: 21241932

Following gene: 21241927

Centisome position: 25.91

GC content: 64.78

Gene sequence:

>1806_bases
TTGAGTCGCACCGGCGCCGACTTCCAACGCGATGCCACCGGCACCTTGCCGATTGCTGCGTATGCGGCGATCGGCGACGG
GCGCACGGTGGCGTTATGCGGTGCGGACGGCAGCATCGACTGGTGGTGCGTGCCGAAAATGGACTCGCCGCCGTTGTTCG
ATCGTCTATTGGATGCAGGCGAAGGCGGCTATTTCACCCTCACGCCGCAACAGCTGCAGCATGTACAACGCCGATACCGC
GACGGCAGCAATATTCTCGAAACGACCTTCGCCACCGCAACCGGCAGCGCACGTCTGACCGAGTCGCTCAACAGCGGCGA
AGCCGGCCGGCTGCCGTGGTCGGAACTTGCGCGACGCATCGAAGGCATCGAAGGCAGCGTGGTCTTCGACCTGATCTACC
GGCCCGGCACCCGTGCCGGCGAAGCCACACCCTGGCAAAGCGAGACGCCGAACGGCCGTGTGCATCACGTCGGCCCGCTC
ATGACCATGCTGCGCTACGACAAGGAAGCAGCGCAGCTGCTGCAGTGCGACGACCGCGGCGTGCACGCCACGCTGGCGAT
CGGCGCAGGCGACACACAGGTGGTCGCGTTGCTGGCCGCCGAAGAAGATGCGCTACCGGTGCCCGCGCTGGAAGACATCG
GTGGGCGCATCGAGCGCAGCGACCAGGAGTGGCGCGAATGGAGCGGCAACCTGTCTTACGCCAATGGTTACCACGATGCG
GTCGTGCGCTCTGCGCTGGCGCTCAAATTTCTATGGTTTTCGCCGACGGGCGCCATTGCCGCCGCGGTCACCACGTCATT
GCCGGAGCAGATTGGCGCAAATGGCAATTGGGATTATCGCTATGCCTGGGTCCGCGATGCCGCCTACACCACCAAGGCCT
TCCTGCGCGTAGGCGCATTGGCCGATGCCAAGGCTGCGTTTAGCTGGTTGATGCGCACCATCCGCCAGCATCGGCCAGGC
GTGCGCCCCTGCTACACCCTGGAGGGCGCGTTGGTGCCCGACGAGCGCGTGATCGATCTTCCCGGCTATCGCAATACGCG
TCCGGTGCGCGTCGGCAACACCGCCAACAACCAGCTGCAGCTGTGCCTGTACGGCGACATCTTCGAAATGGCCGCGCGCT
TTCTCGATGCCGGCCACATCCTGGACCAGGAAACCGCACGCCAGTTGTTCGAGCTCGGCAACGAATGCGCAAACACCTGG
ATGCGCAAGGACGCCGGCTTCTGGGAACTGGAAGCCGCCGAGCATTACACCATGTCCAAAGTGGAATGCTGGCTGGCGCT
GCGCCGCGCCAGCGAGCTGGCCAAGGCCGGCCATCTCTCCACCGCGATGCTGCCACGCTGGGAGCGCGAACAGGCGCGGA
TTCTGGCGTGGATCGATGTGCACTGCTGGTCCGACACCAAGCAGGCTTACACCTTCTACGCGGGCACCGACGACCTGGAC
GCGAGCCTGCTGTTGGCCTCGCGCTTTGGGTTGGGCGGGCCGCGCCGCGAGCGCATGATCGCCACCCGCGATGCCATTGC
CTCAGAACTCGGCAGCGATGCATTGCTGCACCGCTACAGTGGCATGCAACAACGCGAAGGGGCATTTATTGCCTGCTCGT
TCTGGCTGGTGGAAGCCTATGGCCTGCTCGGCGAGCGTGCCGAAGCCAGGCGCTTGTTCGAGCAGTTGCTGGAGCAGTTG
GGCAACGATGTCGCACTGATGCCCGAGATGCTGGACACGAGCACGCGCGCCGCCCTGGGCAACGTACCGCAAGGCTTGAG
CCACCTCGCGCTGATCCACGCAGCGCTAGCCGTGGATGGCGAATAA

Upstream 100 bases:

>100_bases
AGCCGGTAGAAATGGCGCCGCTTTACGTGATTCTGGCATCGCAGGAATCGAGCTACGTCACTGGCGAAGTGTTCGGTGCC
ACCGGCGGCCTGCTGCTGTC

Downstream 100 bases:

>100_bases
GCGCAGCGCAGCACCTGTCGCCTTCACCAGGTTGTTATCGCAGCAAACTCCTTCTCCACTCGGCAGAAGGAGCACGCTAG
ACGGATGCGGCTGCGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MSRTGADFQRDATGTLPIAAYAAIGDGRTVALCGADGSIDWWCVPKMDSPPLFDRLLDAGEGGYFTLTPQQLQHVQRRYR
DGSNILETTFATATGSARLTESLNSGEAGRLPWSELARRIEGIEGSVVFDLIYRPGTRAGEATPWQSETPNGRVHHVGPL
MTMLRYDKEAAQLLQCDDRGVHATLAIGAGDTQVVALLAAEEDALPVPALEDIGGRIERSDQEWREWSGNLSYANGYHDA
VVRSALALKFLWFSPTGAIAAAVTTSLPEQIGANGNWDYRYAWVRDAAYTTKAFLRVGALADAKAAFSWLMRTIRQHRPG
VRPCYTLEGALVPDERVIDLPGYRNTRPVRVGNTANNQLQLCLYGDIFEMAARFLDAGHILDQETARQLFELGNECANTW
MRKDAGFWELEAAEHYTMSKVECWLALRRASELAKAGHLSTAMLPRWEREQARILAWIDVHCWSDTKQAYTFYAGTDDLD
ASLLLASRFGLGGPRRERMIATRDAIASELGSDALLHRYSGMQQREGAFIACSFWLVEAYGLLGERAEARRLFEQLLEQL
GNDVALMPEMLDTSTRAALGNVPQGLSHLALIHAALAVDGE

Sequences:

>Translated_601_residues
MSRTGADFQRDATGTLPIAAYAAIGDGRTVALCGADGSIDWWCVPKMDSPPLFDRLLDAGEGGYFTLTPQQLQHVQRRYR
DGSNILETTFATATGSARLTESLNSGEAGRLPWSELARRIEGIEGSVVFDLIYRPGTRAGEATPWQSETPNGRVHHVGPL
MTMLRYDKEAAQLLQCDDRGVHATLAIGAGDTQVVALLAAEEDALPVPALEDIGGRIERSDQEWREWSGNLSYANGYHDA
VVRSALALKFLWFSPTGAIAAAVTTSLPEQIGANGNWDYRYAWVRDAAYTTKAFLRVGALADAKAAFSWLMRTIRQHRPG
VRPCYTLEGALVPDERVIDLPGYRNTRPVRVGNTANNQLQLCLYGDIFEMAARFLDAGHILDQETARQLFELGNECANTW
MRKDAGFWELEAAEHYTMSKVECWLALRRASELAKAGHLSTAMLPRWEREQARILAWIDVHCWSDTKQAYTFYAGTDDLD
ASLLLASRFGLGGPRRERMIATRDAIASELGSDALLHRYSGMQQREGAFIACSFWLVEAYGLLGERAEARRLFEQLLEQL
GNDVALMPEMLDTSTRAALGNVPQGLSHLALIHAALAVDGE
>Mature_600_residues
SRTGADFQRDATGTLPIAAYAAIGDGRTVALCGADGSIDWWCVPKMDSPPLFDRLLDAGEGGYFTLTPQQLQHVQRRYRD
GSNILETTFATATGSARLTESLNSGEAGRLPWSELARRIEGIEGSVVFDLIYRPGTRAGEATPWQSETPNGRVHHVGPLM
TMLRYDKEAAQLLQCDDRGVHATLAIGAGDTQVVALLAAEEDALPVPALEDIGGRIERSDQEWREWSGNLSYANGYHDAV
VRSALALKFLWFSPTGAIAAAVTTSLPEQIGANGNWDYRYAWVRDAAYTTKAFLRVGALADAKAAFSWLMRTIRQHRPGV
RPCYTLEGALVPDERVIDLPGYRNTRPVRVGNTANNQLQLCLYGDIFEMAARFLDAGHILDQETARQLFELGNECANTWM
RKDAGFWELEAAEHYTMSKVECWLALRRASELAKAGHLSTAMLPRWEREQARILAWIDVHCWSDTKQAYTFYAGTDDLDA
SLLLASRFGLGGPRRERMIATRDAIASELGSDALLHRYSGMQQREGAFIACSFWLVEAYGLLGERAEARRLFEQLLEQLG
NDVALMPEMLDTSTRAALGNVPQGLSHLALIHAALAVDGE

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66329; Mature: 66197

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTGADFQRDATGTLPIAAYAAIGDGRTVALCGADGSIDWWCVPKMDSPPLFDRLLDAG
CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHCC
EGGYFTLTPQQLQHVQRRYRDGSNILETTFATATGSARLTESLNSGEAGRLPWSELARRI
CCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHH
EGIEGSVVFDLIYRPGTRAGEATPWQSETPNGRVHHVGPLMTMLRYDKEAAQLLQCDDRG
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHCCCCC
VHATLAIGAGDTQVVALLAAEEDALPVPALEDIGGRIERSDQEWREWSGNLSYANGYHDA
CEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHH
VVRSALALKFLWFSPTGAIAAAVTTSLPEQIGANGNWDYRYAWVRDAAYTTKAFLRVGAL
HHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCH
ADAKAAFSWLMRTIRQHRPGVRPCYTLEGALVPDERVIDLPGYRNTRPVRVGNTANNQLQ
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCCEEE
LCLYGDIFEMAARFLDAGHILDQETARQLFELGNECANTWMRKDAGFWELEAAEHYTMSK
EEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
VECWLALRRASELAKAGHLSTAMLPRWEREQARILAWIDVHCWSDTKQAYTFYAGTDDLD
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCC
ASLLLASRFGLGGPRRERMIATRDAIASELGSDALLHRYSGMQQREGAFIACSFWLVEAY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCEEEEHHHHHHHH
GLLGERAEARRLFEQLLEQLGNDVALMPEMLDTSTRAALGNVPQGLSHLALIHAALAVDG
HHHCCHHHHHHHHHHHHHHHCCCEEECHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
E
C
>Mature Secondary Structure 
SRTGADFQRDATGTLPIAAYAAIGDGRTVALCGADGSIDWWCVPKMDSPPLFDRLLDAG
CCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHCC
EGGYFTLTPQQLQHVQRRYRDGSNILETTFATATGSARLTESLNSGEAGRLPWSELARRI
CCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHH
EGIEGSVVFDLIYRPGTRAGEATPWQSETPNGRVHHVGPLMTMLRYDKEAAQLLQCDDRG
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHHHCCCCC
VHATLAIGAGDTQVVALLAAEEDALPVPALEDIGGRIERSDQEWREWSGNLSYANGYHDA
CEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHH
VVRSALALKFLWFSPTGAIAAAVTTSLPEQIGANGNWDYRYAWVRDAAYTTKAFLRVGAL
HHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCH
ADAKAAFSWLMRTIRQHRPGVRPCYTLEGALVPDERVIDLPGYRNTRPVRVGNTANNQLQ
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCCEEE
LCLYGDIFEMAARFLDAGHILDQETARQLFELGNECANTWMRKDAGFWELEAAEHYTMSK
EEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
VECWLALRRASELAKAGHLSTAMLPRWEREQARILAWIDVHCWSDTKQAYTFYAGTDDLD
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCC
ASLLLASRFGLGGPRRERMIATRDAIASELGSDALLHRYSGMQQREGAFIACSFWLVEAY
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHCCCEEEEHHHHHHHH
GLLGERAEARRLFEQLLEQLGNDVALMPEMLDTSTRAALGNVPQGLSHLALIHAALAVDG
HHHCCHHHHHHHHHHHHHHHCCCEEECHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA