| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yxkO [H]
Identifier: 21241929
GI number: 21241929
Start: 1336591
End: 1337460
Strand: Direct
Name: yxkO [H]
Synonym: XAC1175
Alternate gene names: 21241929
Gene position: 1336591-1337460 (Clockwise)
Preceding gene: 21241928
Following gene: 77748565
Centisome position: 25.83
GC content: 69.2
Gene sequence:
>870_bases ATGGCTGCCGCACGCCTTCGCACGCTGACCGCTGCCGCACTGCGTGCGATGCCGCTGCCATCGCCCGGCGGCGACAAGGA GCAGCGGGGGCGCGTGTTGGTGGTGGGGGGCTCGATGCGCGTGCCCGGTGCGGCATTGCTGGCCGGGGAAGCTGCATTGC GCGCGGGCGCCGGCAAATTGCAGATCGCCACCGCTGCCAGCGTGGCGCCGGCAATGGCCCTGGCGGTGCCCGAGGCATTG GTGCTGGGGCTGGGGCAGAACGGGCAGGGCGAGATTACGCGCGGGCACCGTGCATTGGACGCGGCGCTGGCAGCCTGCGA CGCGGCCGTGATCGGGCCTGGCATGGCGTCGACCACGACGGCAACGGCGCTGGTCAAGCTGGCCGCTGCAAAGGCGGTCT GTCCCTTGGTGCTGGACGCCGGTGCGTTGTCGCGCAGCTTGCGTGCGCCGCCTGGGCGGCCCTTCGTGCTGACGCCGCAT GCGGGGGAGATGGCGACCCTCGCTGGCGACGACAAGGCTGCAGTGGAAGCAGCGCCGGGCGAGTACGCGCTGGCCTTCGC GCAGAAGATGCGCAGCGTGGTGATCGTCAAGGGGGCGGACAGTTTCATCGCCGGGCCTGACGGTGCGCTATGGGTGCATC GCGGTGGTGTGCCTGGGCTGGGCACGTCGGGCTCGGGCGATACCTTGGCCGGATTGATCGCAGGTTTCGCTGCGCGGGGC AGCGATGCGTTGACCGCCGCGCTGTGGGGTGTATTTGTGCACGCGGTAGCGGGTAAACAGCTGTCCAGGCGGATTGGCAC GGTTGGATTTCTGGCACGCGAGATTCCACAAGAAGTGCCCGGGATTTTGGATCGTTTGTCGCGCAAGTGA
Upstream 100 bases:
>100_bases ATGGGCAATCGCTGCAACTGGTGCGCACCAAGTTCGTGCCGCCAGAGCTGGCCGATGAGCCGGTGACCACCGAATCCGAT CGCCCGGCTGGAGCGCGCTG
Downstream 100 bases:
>100_bases GTGAGCCCCTCCCTGCGGGAGAGGGGTTGGGGTGAGGGTACGGCTGCTGGGATTGGTGAAGAGTGAAGTCTTTTACGTTG TTTTGTTCGCGATGCATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEAL VLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPH AGEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK
Sequences:
>Translated_289_residues MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEAL VLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPH AGEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK >Mature_288_residues AAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEALV LGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHA GEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARGS DALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=284, Percent_Identity=30.9859154929577, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 [H]
Pfam domain/function: PF01256 Carb_kinase [H]
EC number: NA
Molecular weight: Translated: 28746; Mature: 28615
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKL CCCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE QIATAASVAPAMALAVPEALVLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTT EEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHAGEMATLAGDDKAAVEAAPG HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCEEECCCC EYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG HHHHHHHHHHCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKL CCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE QIATAASVAPAMALAVPEALVLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTT EEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHAGEMATLAGDDKAAVEAAPG HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCEEECCCC EYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG HHHHHHHHHHCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]