| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is purA [H]
Identifier: 21241912
GI number: 21241912
Start: 1318709
End: 1320001
Strand: Direct
Name: purA [H]
Synonym: XAC1158
Alternate gene names: 21241912
Gene position: 1318709-1320001 (Clockwise)
Preceding gene: 21241911
Following gene: 21241913
Centisome position: 25.48
GC content: 65.82
Gene sequence:
>1293_bases ATGGGTCAGTCAGTTGTCGTGCTCGGTGCCCAGTGGGGCGATGAAGGCAAAGGCAAGATCGTCGATCTGCTCACCGAGGA AATCGGTGCGGTGGTCCGCTTCCAGGGCGGCCACAACGCCGGCCACACGCTTGTCATCAACGGCAAGAAGACCGTCTTGC ATCTGATTCCGTCCGGCATCCTGCGCGACGACGCGCTGTGCCTGATCGGCAATGGCGTGGTGATCTCCCCGGCCGCGTTG ATCAAGGAAATCAGCGAGCTGGAAGACGCCGGCGTGGAAGTGCGTTCGCGCCTGAAGATCTCCCCGGCTGCGCCGTTGAT CATGCCCTACCACATCGCGCTGGATCAGGCGCGCGAGAAGGCGGCCGGCGGCAAGGCCATCGGCACCACCGGCCGCGGCA TCGGCCCGGCCTACGAAGACAAGGTGGCGCGTCGCGGCATCCGCATCGCCGACCTGCATTACCCGCCGCAGCTGGAAGAG TTGCTGCGCACTGCGCTGGACTACCACAACTTCGTGCTGACCAAGTACCTGGGCGTGGAAGCGGTCGATTTCCAGAAGAC CTACGACGAGGCGCTGGCCTTCGGCGAGTACGTGCAGCCGATGAAGTCGGACGTGGCCGGGATCCTGCACGACCTGCGCA AGCAGGGTAAGCGCGTGTTGTTCGAAGGCGCGCAGGGTGCGTTGCTGGACATCGACCACGGCACCTATCCGTACGTCACC AGTTCCAACACCACCGTGGGCGGCGCATTGGCCGGTACCGGCGTTGGCGCCGATGCGATCGACTACGTACTCGGCATTGC CAAAGCATATGCCACGCGCGTCGGCGGCGGCCCGTTCCCGACCGAACTGGACGACGAAGTGGGCCAGGGTATCCGCGACC GCGGTGCCGAGTACGGCGCGTCCACCGGTCGCCCGCGTCGCTGCGGCTGGATGGATATCGTGGCGCTCAAGCGTGCGGTG GCCATCAACGGCATTTCCGGCCTGTGCATCACCAAGCTCGACGTGCTCGACGGCATGGAGAAGCTGAAGATCTGCATCGC CTACGAATATCACGGCAAGCGCACCGAGTACGCGCCGCTGGACGCGCAGGGCTGGGAAGAGTGCACCCCCGTGTACCTGG AGTTCCCGGGCTGGAGCGAAAACACCCACGGCATCACCGTGTGGGACGACCTGCCGCCGGCCGCCCGCGCCTACCTGCGC GCGCTGGAGGAACTGGCCGGCTGCCCGATCTCGATCGTTTCCACCGGCCCGGACCGCGACCACACCATGGTGCTGCAGGA CCCGTTCGCCTGA
Upstream 100 bases:
>100_bases GCTCCCCGATGGAGTCGCGCGCAGGGTGTCGCGGCCAGCCCTGCAGCGGTCCCATCCCGCGGCCCCGATGGCCGCAGCAA AACGTAGGAGTTCACCCGTC
Downstream 100 bases:
>100_bases TCGGCTGATGCGTGATTGAACCGACGAAAGCCCTGTGAAAGCGGGGCTTTTGTTTGCAGAACGCCATTGCGTTGCCTCAT CCACGCGCCCCGCACCTTCC
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAAL IKEISELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEE LLRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGEYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDEVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAV AINGISGLCITKLDVLDGMEKLKICIAYEYHGKRTEYAPLDAQGWEECTPVYLEFPGWSENTHGITVWDDLPPAARAYLR ALEELAGCPISIVSTGPDRDHTMVLQDPFA
Sequences:
>Translated_430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAAL IKEISELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEE LLRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGEYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDEVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAV AINGISGLCITKLDVLDGMEKLKICIAYEYHGKRTEYAPLDAQGWEECTPVYLEFPGWSENTHGITVWDDLPPAARAYLR ALEELAGCPISIVSTGPDRDHTMVLQDPFA >Mature_429_residues GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAALI KEISELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEEL LRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGEYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVTS SNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDEVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAVA INGISGLCITKLDVLDGMEKLKICIAYEYHGKRTEYAPLDAQGWEECTPVYLEFPGWSENTHGITVWDDLPPAARAYLRA LEELAGCPISIVSTGPDRDHTMVLQDPFA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=428, Percent_Identity=42.0560747663551, Blast_Score=330, Evalue=1e-90, Organism=Homo sapiens, GI34577063, Length=430, Percent_Identity=40.6976744186046, Blast_Score=305, Evalue=7e-83, Organism=Homo sapiens, GI40316944, Length=398, Percent_Identity=40.2010050251256, Blast_Score=291, Evalue=9e-79, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=60.9302325581395, Blast_Score=543, Evalue=1e-155, Organism=Caenorhabditis elegans, GI25146553, Length=434, Percent_Identity=43.0875576036866, Blast_Score=340, Evalue=8e-94, Organism=Caenorhabditis elegans, GI25146555, Length=434, Percent_Identity=43.0875576036866, Blast_Score=340, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6324109, Length=428, Percent_Identity=42.7570093457944, Blast_Score=340, Evalue=3e-94, Organism=Drosophila melanogaster, GI21356033, Length=418, Percent_Identity=40.9090909090909, Blast_Score=321, Evalue=5e-88,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 46200; Mature: 46069
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGI CCCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCEEEEECCCCC LRDDALCLIGNGVVISPAALIKEISELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREK CCCCCEEEECCCEEECHHHHHHHHHHHHHCCHHHHHCEEECCCCCCEEEHHHHHHHHHHH AAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEELLRTALDYHNFVLTKYLGVE HCCCCEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCE AVDFQKTYDEALAFGEYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEE SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDEVGQGIRDRGAEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGISGLCITKLDVLDGMEKLKICIAYEYHGKRTEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWSENTHGITVWDDLPPAARAYLRALEELAGCPISIVSTGPDRD CCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC HTMVLQDPFA CEEEEECCCC >Mature Secondary Structure GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGI CCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCEEEEECCCCC LRDDALCLIGNGVVISPAALIKEISELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREK CCCCCEEEECCCEEECHHHHHHHHHHHHHCCHHHHHCEEECCCCCCEEEHHHHHHHHHHH AAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEELLRTALDYHNFVLTKYLGVE HCCCCEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCE AVDFQKTYDEALAFGEYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEE SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDEVGQGIRDRGAEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGISGLCITKLDVLDGMEKLKICIAYEYHGKRTEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWSENTHGITVWDDLPPAARAYLRALEELAGCPISIVSTGPDRD CCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC HTMVLQDPFA CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA