| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hspA [H]
Identifier: 21241905
GI number: 21241905
Start: 1311633
End: 1312109
Strand: Direct
Name: hspA [H]
Synonym: XAC1151
Alternate gene names: 21241905
Gene position: 1311633-1312109 (Clockwise)
Preceding gene: 21241902
Following gene: 21241906
Centisome position: 25.34
GC content: 62.68
Gene sequence:
>477_bases ATGAACATCGTTCGTTATCCCCAATTTCCCACCCACGCGCTGCAGAACGAGATCAAGCATGTGTTCGATCGCTTCTTCGA GCAGAACGGCGACACCGACGAATCGGCCGTGGTGACCGCGCAGTGGGTGCCGCGCGTTGACATCAAGGAAGAGGTGAATC ACTTCGTGCTGTACGCCGATTTGCCGGGCATCGATCCGAGCCAGATCGAGGTGCAGATGGACAAGGGCATCCTGTCGATC CGGGGGGAGCGCAAGAGCGAATCCAGCACCGAAACCGAACGCTTCTCGCGCATCGAGCGCCGCTACGGCAGCTTCCATCG CCGCTTCGCGCTGCCCGACAGCGCCGACGCCGATGGCATCACGGCTGCAGGCCGTAACGGCGTGCTGGAAATCCGCATTC CCAAGCGCCCGGCCGCCACGCCGCGCCGTATCCAGGTTGGCAACGGTCAGAACACCAGCGGCAGCACGGTGCAGTAA
Upstream 100 bases:
>100_bases CTTGAAATCCGTCCGGCCACGCCTATCTGACGCACATGGCCGGCGCAGCTGCGCACCTTGCAGTCGCCGGTCCCGTCATC AACCTTTTTGGAGGCTCGCA
Downstream 100 bases:
>100_bases GCGCAAGAAACGTCGCGGCGGCGCGCGATGCAGGCGCGTGGTGTTCGCCTGGCCGGCCTGTACTGTGCGTGCAGGCTGGC CAGGCGACCGGCAGTTCCGA
Product: low molecular weight heat shock protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNIVRYPQFPTHALQNEIKHVFDRFFEQNGDTDESAVVTAQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSI RGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKRPAATPRRIQVGNGQNTSGSTVQ
Sequences:
>Translated_158_residues MNIVRYPQFPTHALQNEIKHVFDRFFEQNGDTDESAVVTAQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSI RGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKRPAATPRRIQVGNGQNTSGSTVQ >Mature_158_residues MNIVRYPQFPTHALQNEIKHVFDRFFEQNGDTDESAVVTAQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSI RGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKRPAATPRRIQVGNGQNTSGSTVQ
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 17852; Mature: 17852
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVRYPQFPTHALQNEIKHVFDRFFEQNGDTDESAVVTAQWVPRVDIKEEVNHFVLYAD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCEEEEEEE LPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI CCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCE TAAGRNGVLEIRIPKRPAATPRRIQVGNGQNTSGSTVQ EECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MNIVRYPQFPTHALQNEIKHVFDRFFEQNGDTDESAVVTAQWVPRVDIKEEVNHFVLYAD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCEEEEEEE LPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI CCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCE TAAGRNGVLEIRIPKRPAATPRRIQVGNGQNTSGSTVQ EECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA