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The map label for this gene is glpQ [H]

Identifier: 21241901

GI number: 21241901

Start: 1306388

End: 1307209

Strand: Direct

Name: glpQ [H]

Synonym: XAC1147

Alternate gene names: 21241901

Gene position: 1306388-1307209 (Clockwise)

Preceding gene: 77748561

Following gene: 21241902

Centisome position: 25.24

GC content: 64.48

Gene sequence:

>822_bases
GTGGTGGTTGCGCACCGCGGGTGTCATGCCGCCGCGCCACAGCATGGCTTCACCGAGACCGCGCCGGAAAATTCGCTGGC
GGCGTTGGAGCGCTGCATCGCCATCGGCGCCGATGTGATGGAAACCGATGTGCGGCGTGCCGCCGATAGCAGCCTGGTGA
TGCTGCATGACGCCACCGTGGACCGCACCACCGATGGCACCGGCAAGCTGTCCGAGTTGACCCTGGCCGATCTGCAGAAG
CTGCGCCTGCGCAGCGACGAAGGTGGCGCACAGGCACCGTTGACCGACCAGCGCGTGGTCACGCTCGATCAGATGCTGGC
CAGGGCCAAGGGGCACATCCTGCTCAACCTGGATGTCAAGGACGCGATCTACGTGCAGGTGATCGACGCGGTCGCACGCG
CCGGCATGCAGCATCAGGTGATCGTCAAGGCCGAAGCCGGCATGTTCACCGCGCCACTGGCGGCGATGCCGCCGTTCGAT
ACGGTGTACTTCTTCCCGATCCTGATCAACGCGCATGGCAAGGCCGATCTTGCTGCCATTGCAACGGCACAGACACGCAA
TGCACGGCCGATGGCATTCGAGTTGCCCAAGATGACCGCCGCGCAATTGCCGGCACTGGCAGCGGTAAGCAAGGCGCATA
ACGTGCGGCTGATGGTCAATTCGTTGTGGGAAGGCTTCATTGCCGGCTATGGCGGCGATGCGGACGCCGAGCGCGATCCC
GACAAGGTCTGGGGCCGGATGCACCGCGACGGTGTGTCGATCATCCAGACCGATGCGCCGGAAGCCTTGCTGCGCTATCG
CGCCACGTTGGAAAAGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCCGTGCTGTGCGCGGTCGTGGCCACCGCGGCGAGCGCCGCACCGACAGGCGTGGCCGCGATCCAGGCACGCCTGA
CCAATCCGCAGGGCGGCCTC

Downstream 100 bases:

>100_bases
GCGGAAGCGACCAGGCCGCCGTCCCAAGCGGTGGCAACGAGGTCTAGCACGGCGCGCCGCGCACCAAACTACTCGACGGA
CGAGATGTCACGTCTAAACG

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MVVAHRGCHAAAPQHGFTETAPENSLAALERCIAIGADVMETDVRRAADSSLVMLHDATVDRTTDGTGKLSELTLADLQK
LRLRSDEGGAQAPLTDQRVVTLDQMLARAKGHILLNLDVKDAIYVQVIDAVARAGMQHQVIVKAEAGMFTAPLAAMPPFD
TVYFFPILINAHGKADLAAIATAQTRNARPMAFELPKMTAAQLPALAAVSKAHNVRLMVNSLWEGFIAGYGGDADAERDP
DKVWGRMHRDGVSIIQTDAPEALLRYRATLEKR

Sequences:

>Translated_273_residues
MVVAHRGCHAAAPQHGFTETAPENSLAALERCIAIGADVMETDVRRAADSSLVMLHDATVDRTTDGTGKLSELTLADLQK
LRLRSDEGGAQAPLTDQRVVTLDQMLARAKGHILLNLDVKDAIYVQVIDAVARAGMQHQVIVKAEAGMFTAPLAAMPPFD
TVYFFPILINAHGKADLAAIATAQTRNARPMAFELPKMTAAQLPALAAVSKAHNVRLMVNSLWEGFIAGYGGDADAERDP
DKVWGRMHRDGVSIIQTDAPEALLRYRATLEKR
>Mature_273_residues
MVVAHRGCHAAAPQHGFTETAPENSLAALERCIAIGADVMETDVRRAADSSLVMLHDATVDRTTDGTGKLSELTLADLQK
LRLRSDEGGAQAPLTDQRVVTLDQMLARAKGHILLNLDVKDAIYVQVIDAVARAGMQHQVIVKAEAGMFTAPLAAMPPFD
TVYFFPILINAHGKADLAAIATAQTRNARPMAFELPKMTAAQLPALAAVSKAHNVRLMVNSLWEGFIAGYGGDADAERDP
DKVWGRMHRDGVSIIQTDAPEALLRYRATLEKR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=118, Percent_Identity=38.135593220339, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 29483; Mature: 29483

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAHRGCHAAAPQHGFTETAPENSLAALERCIAIGADVMETDVRRAADSSLVMLHDATV
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC
DRTTDGTGKLSELTLADLQKLRLRSDEGGAQAPLTDQRVVTLDQMLARAKGHILLNLDVK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
DAIYVQVIDAVARAGMQHQVIVKAEAGMFTAPLAAMPPFDTVYFFPILINAHGKADLAAI
HHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCHHEEEEEEEECCCCCCHHHE
ATAQTRNARPMAFELPKMTAAQLPALAAVSKAHNVRLMVNSLWEGFIAGYGGDADAERDP
EECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCCCH
DKVWGRMHRDGVSIIQTDAPEALLRYRATLEKR
HHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVVAHRGCHAAAPQHGFTETAPENSLAALERCIAIGADVMETDVRRAADSSLVMLHDATV
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCC
DRTTDGTGKLSELTLADLQKLRLRSDEGGAQAPLTDQRVVTLDQMLARAKGHILLNLDVK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
DAIYVQVIDAVARAGMQHQVIVKAEAGMFTAPLAAMPPFDTVYFFPILINAHGKADLAAI
HHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCHHEEEEEEEECCCCCCHHHE
ATAQTRNARPMAFELPKMTAAQLPALAAVSKAHNVRLMVNSLWEGFIAGYGGDADAERDP
EECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCCCH
DKVWGRMHRDGVSIIQTDAPEALLRYRATLEKR
HHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]