| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241831
Identifier: 21241831
GI number: 21241831
Start: 1226193
End: 1226915
Strand: Reverse
Name: 21241831
Synonym: XAC1069
Alternate gene names: NA
Gene position: 1226915-1226193 (Counterclockwise)
Preceding gene: 21241834
Following gene: 21241830
Centisome position: 23.71
GC content: 59.06
Gene sequence:
>723_bases GTGGTAGGGACCGTGGGTGGCCTGAGCACGGTGGGCATCACTGGGCAATTGCTGGTAGACGGCTCGATCACCGCGAACAA GCTGACAGTGAACTCGCTAGCCGCCATCACCGCCAACATGGGAACCGTCAACGGCGGCACGTTCAAGACGCACACGCTCG ATGTCAACGGCAATATCGTCGACGCGCACGAGTTCCGCGTCGAGTTGTCCAACGTCGGCGCTTGGCCCATTTGGGTCGGG GCAGGAGACAAGAACGAGAACAACGCCGTCTTCTGGGTTGATCGCTCGGGCAACGCAGGCTTCAAAGGCCGCGTGTCCGC GCCAAACATCGTCGGCAACTTCAATCGCTTGGCCCCCGTAGATTGGACTGGCTCGGTGTCGATGAATAACACCACGGGAA TCGTCAACTTCACACTCCCGGCGCCTGTGCTACTAGGCGAGTCGCACACGCCGCTGATCGTACTCAGTGCAGGCGTGGAC CATGCGTCGTCAGACAACGGGCGTGCATTCATTTACATCCAAAAGCTAGTTGGTGCGGCCTGGGTGACGGTGGATACCTA CTTCATCATTCAAGGCTCGGGCCACAAGTTCAACCATGCGCTCAATTACGTCGGAGACCCGACAACGGCGGAAGCCACCT ACCGTGTGGCCATCGCCGATTCTTCGCGCGGTGACCGCCTGATCATCACAAAGGTCCGTGGATTCATCCAAGGACTCCGA TAA
Upstream 100 bases:
>100_bases GCTTAGTGCATACCCGGGCGGGTCGGACTTCGTAGTCCAGTCGGATCGCTTCGCCATCACGACACCAACCGCGGGCTACG GTGCTCGCAAGTTTCCCTTC
Downstream 100 bases:
>100_bases CGAGGAACTAATGGCAGAAACACCAGGCTACGTTTCCAATGCAAAGCTCGCGGAACGCATCTCGGCATTGGTAGATCGCT GGAACACGCGCGAGGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MVGTVGGLSTVGITGQLLVDGSITANKLTVNSLAAITANMGTVNGGTFKTHTLDVNGNIVDAHEFRVELSNVGAWPIWVG AGDKNENNAVFWVDRSGNAGFKGRVSAPNIVGNFNRLAPVDWTGSVSMNNTTGIVNFTLPAPVLLGESHTPLIVLSAGVD HASSDNGRAFIYIQKLVGAAWVTVDTYFIIQGSGHKFNHALNYVGDPTTAEATYRVAIADSSRGDRLIITKVRGFIQGLR
Sequences:
>Translated_240_residues MVGTVGGLSTVGITGQLLVDGSITANKLTVNSLAAITANMGTVNGGTFKTHTLDVNGNIVDAHEFRVELSNVGAWPIWVG AGDKNENNAVFWVDRSGNAGFKGRVSAPNIVGNFNRLAPVDWTGSVSMNNTTGIVNFTLPAPVLLGESHTPLIVLSAGVD HASSDNGRAFIYIQKLVGAAWVTVDTYFIIQGSGHKFNHALNYVGDPTTAEATYRVAIADSSRGDRLIITKVRGFIQGLR >Mature_240_residues MVGTVGGLSTVGITGQLLVDGSITANKLTVNSLAAITANMGTVNGGTFKTHTLDVNGNIVDAHEFRVELSNVGAWPIWVG AGDKNENNAVFWVDRSGNAGFKGRVSAPNIVGNFNRLAPVDWTGSVSMNNTTGIVNFTLPAPVLLGESHTPLIVLSAGVD HASSDNGRAFIYIQKLVGAAWVTVDTYFIIQGSGHKFNHALNYVGDPTTAEATYRVAIADSSRGDRLIITKVRGFIQGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25309; Mature: 25309
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGTVGGLSTVGITGQLLVDGSITANKLTVNSLAAITANMGTVNGGTFKTHTLDVNGNIV CCCCCCCCEEECEEEEEEECCCCEECEEEECEEEEEEECCCCCCCCEEEEEEEECCCCEE DAHEFRVELSNVGAWPIWVGAGDKNENNAVFWVDRSGNAGFKGRVSAPNIVGNFNRLAPV EHHEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCEECCCCCCCCC DWTGSVSMNNTTGIVNFTLPAPVLLGESHTPLIVLSAGVDHASSDNGRAFIYIQKLVGAA CCCCEEEECCCCEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHCEE WVTVDTYFIIQGSGHKFNHALNYVGDPTTAEATYRVAIADSSRGDRLIITKVRGFIQGLR EEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHCCC >Mature Secondary Structure MVGTVGGLSTVGITGQLLVDGSITANKLTVNSLAAITANMGTVNGGTFKTHTLDVNGNIV CCCCCCCCEEECEEEEEEECCCCEECEEEECEEEEEEECCCCCCCCEEEEEEEECCCCEE DAHEFRVELSNVGAWPIWVGAGDKNENNAVFWVDRSGNAGFKGRVSAPNIVGNFNRLAPV EHHEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCEECCCCCCCCC DWTGSVSMNNTTGIVNFTLPAPVLLGESHTPLIVLSAGVDHASSDNGRAFIYIQKLVGAA CCCCEEEECCCCEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEHHHCEE WVTVDTYFIIQGSGHKFNHALNYVGDPTTAEATYRVAIADSSRGDRLIITKVRGFIQGLR EEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA