| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is pntA [H]
Identifier: 21241688
GI number: 21241688
Start: 1082219
End: 1083115
Strand: Direct
Name: pntA [H]
Synonym: XAC0918
Alternate gene names: 21241688
Gene position: 1082219-1083115 (Clockwise)
Preceding gene: 21241687
Following gene: 21241689
Centisome position: 20.91
GC content: 70.12
Gene sequence:
>897_bases ATGGCTGTGCAGGTGCTGGTACTGAAAGAGCAGGCCGCCGGCGAACGCCGTGTGGCCGCGACGCCGGAAACGGTCAAGAA ACTGGTCGCGCTCGGTGCCGGCGTGTGGATCGAACCGGGGGCCGGCCGGGCCAGCAGCATGGACGATGACGCGTATCTGC AGGCCGGTGCGCAGCCTGCCGGCGCCGACGCCGTGGCGCAGGCCGAGATGGTGCTGTGCGTGCAGGCGCCTTCTACCGAC ACGTTGCTCCGGTGCAAGCCGCACGCGGTGGTGATCGGCATGCTGGCGCCGGATGCAGACCCTGCGCGTGCGCAGGCGTT TGCCGCGCGGCAATTGATTGCGTTTCCACTGGAGCGCCTGCCGCGCACCACGCGCGCGCAGTCGATGGATGTGTTGAGCT CGCAGGCCGGCATGGCCGGCTACAAGGCGATGCTGATTGCCGCGCAGCTGGCGCCGCGCTTTTTTCCGATGCTGACCACC GCGGCCGGCACCATGCGCCCGTGCAAGGTGCTGGTGATCGGCGCGGGCGTGGCCGGCCTGCAGGCGATCGCCACCGCCAA GCGGCTGGGCGCGCAGGTGGAAGGCTTCGATGTGCGGCCGGAAACGCGTGAGCAGATCGCCTCGCTGGGTGCGCGATTTC TGGACCTGGGCGTGAGCGCTGCCGGCGAAGGCGGCTACGCGCGTCAACTCAGCGACGACGAACGCGCCGAACAGCAGCGT CGTCTGGCCGAACACCTCACCGGTGTGGATGTGGTGGTGTGCACTGCAGCGGTTCCGGGCCGGCCGGCACCGAAGATCGT GACCACCGAGATGGCACGCGGCATGCGCGCCGGCAGCGTGATCGTGGACCTGGCGGCGGAAACCGGCGGCAATTGCGCGG CCACCCGCCCGGGGTAG
Upstream 100 bases:
>100_bases ACTGACGCTCTCGCCGAGAGAATGATCCAAGCTTCGCTACCTGCGCGCGCACCGCGCTCTGCTAGCATCGCCGCGACTGG GCGCAAGACCGGAGCAACCC
Downstream 100 bases:
>100_bases ACGTATGACCTCGACGGCGTGGTCATCGCTGGCCCGCTCAATCTGGCCAGCCAGGGCGCAGTGCATGCCAGCGAGATGTT CGCGCGCAACGTGTACGCCT
Product: pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAVQVLVLKEQAAGERRVAATPETVKKLVALGAGVWIEPGAGRASSMDDDAYLQAGAQPAGADAVAQAEMVLCVQAPSTD TLLRCKPHAVVIGMLAPDADPARAQAFAARQLIAFPLERLPRTTRAQSMDVLSSQAGMAGYKAMLIAAQLAPRFFPMLTT AAGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLSDDERAEQQR RLAEHLTGVDVVVCTAAVPGRPAPKIVTTEMARGMRAGSVIVDLAAETGGNCAATRPG
Sequences:
>Translated_298_residues MAVQVLVLKEQAAGERRVAATPETVKKLVALGAGVWIEPGAGRASSMDDDAYLQAGAQPAGADAVAQAEMVLCVQAPSTD TLLRCKPHAVVIGMLAPDADPARAQAFAARQLIAFPLERLPRTTRAQSMDVLSSQAGMAGYKAMLIAAQLAPRFFPMLTT AAGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLSDDERAEQQR RLAEHLTGVDVVVCTAAVPGRPAPKIVTTEMARGMRAGSVIVDLAAETGGNCAATRPG >Mature_297_residues AVQVLVLKEQAAGERRVAATPETVKKLVALGAGVWIEPGAGRASSMDDDAYLQAGAQPAGADAVAQAEMVLCVQAPSTDT LLRCKPHAVVIGMLAPDADPARAQAFAARQLIAFPLERLPRTTRAQSMDVLSSQAGMAGYKAMLIAAQLAPRFFPMLTTA AGTMRPCKVLVIGAGVAGLQAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLSDDERAEQQRR LAEHLTGVDVVVCTAAVPGRPAPKIVTTEMARGMRAGSVIVDLAAETGGNCAATRPG
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=298, Percent_Identity=41.2751677852349, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI122939153, Length=298, Percent_Identity=41.2751677852349, Blast_Score=215, Evalue=5e-56, Organism=Escherichia coli, GI1787887, Length=292, Percent_Identity=46.9178082191781, Blast_Score=257, Evalue=7e-70, Organism=Caenorhabditis elegans, GI17550456, Length=298, Percent_Identity=39.9328859060403, Blast_Score=219, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 30866; Mature: 30735
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQVLVLKEQAAGERRVAATPETVKKLVALGAGVWIEPGAGRASSMDDDAYLQAGAQPA CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCC GADAVAQAEMVLCVQAPSTDTLLRCKPHAVVIGMLAPDADPARAQAFAARQLIAFPLERL CCHHHHHEEEEEEEECCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC PRTTRAQSMDVLSSQAGMAGYKAMLIAAQLAPRFFPMLTTAAGTMRPCKVLVIGAGVAGL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH QAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLSDDERAEQQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHH RLAEHLTGVDVVVCTAAVPGRPAPKIVTTEMARGMRAGSVIVDLAAETGGNCAATRPG HHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEECCCCC >Mature Secondary Structure AVQVLVLKEQAAGERRVAATPETVKKLVALGAGVWIEPGAGRASSMDDDAYLQAGAQPA EEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCC GADAVAQAEMVLCVQAPSTDTLLRCKPHAVVIGMLAPDADPARAQAFAARQLIAFPLERL CCHHHHHEEEEEEEECCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHC PRTTRAQSMDVLSSQAGMAGYKAMLIAAQLAPRFFPMLTTAAGTMRPCKVLVIGAGVAGL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH QAIATAKRLGAQVEGFDVRPETREQIASLGARFLDLGVSAAGEGGYARQLSDDERAEQQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHH RLAEHLTGVDVVVCTAAVPGRPAPKIVTTEMARGMRAGSVIVDLAAETGGNCAATRPG HHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]