| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gfo [H]
Identifier: 21241658
GI number: 21241658
Start: 1049347
End: 1050483
Strand: Direct
Name: gfo [H]
Synonym: XAC0888
Alternate gene names: 21241658
Gene position: 1049347-1050483 (Clockwise)
Preceding gene: 21241650
Following gene: 21241664
Centisome position: 20.28
GC content: 62.18
Gene sequence:
>1137_bases ATGCCCACACTCGCGAAGGAGGTTTGCATGTCCGTGGAATCGATCACACGTCGCCGCTTGCTTGCCGCCTTTGGCGGTGC AGGCATCCTGCTCGCTGCACCGACGTGGGCAGTGCCAAAGAAAAAGCCCGGAAAACCGCTCAATGTCGCGTTGGTCGGGT TGGGTAGTTATGCCAGCGAACAGCTCGCGCCCGGTCTGGCGCTGACCAAGCATTGCAAGCTCGCCGGTATCGTCACCGGC ACGCCGTCGAAGATTCCGCAGTGGCAGTCCAAGTACGGCATCGCCGACCGCAATGTCTACAGCTACGAGAACTTCGATCG CATCGCCGACAACGACGACATCGATGTGGTGTACATCGTCACGCCCACGCATCTGCATGCGCCACTGACCCTGCGTGCGG CTGCCGCAGGCAAGCACGTGTGGTGCGAAAAGCCGATGGCGATGCATGCCGGTGAATGCGAGGCGATGATTGCTGCCTGC AAACGCAACAAGGTGGCGCTGACGATCGGCTACCGCATGCAGCATGAGCCAAACACGCGGCGCGTGATTGCGATGGCCAG CGAAAAACCGTTCGGTGCGATGCAACGCGTGCGTGCCGAGGCCGGGTACAACGGTTATCAAGGCACTGCCAAGGCCGACC GCCCATGGCGGTTGCGTTCGCAGTTCGGTGGTGGCGCGATGTACGACATGGGCGTGTATCCGCTCAATGCCGCGCGCTAC ACCGTGGGTGCCGAGCCGCTGGCGGTGACCGCCAAACGCTGGACCGACCGACCCGATCTGTTCGATGAAGTCGACGAACA CATGGACTTCACCCTGGAGTTTCCCAATGCGGTCCGGGCCGAGTGCAAGACCAGCTTCGGCAAGAACATGAATGTGCTGC GTGCCGAATGCGAGCGCGGTTGGTACGAATTGTCGCCGTTCCAGAGCTATCAGGGCGTGACCGGCAAGGCCAGCGATGGA CGCGTGTTCGACGCCAAGGTGCCGCATCAGCAGGCGCTGCAGATGGACGAAGACGCGCTGGCGATCATGAACGGCACACC ATTACGTGCGCCGGGCGAAGAAGGCCTGCGCGACATCCGCATCGTCGATGCGATCTATCGCTCGGCGCGCGAGGGCAGCA AGCGCATCGTGCTGTAA
Upstream 100 bases:
>100_bases GTCATGCGCAATGCTCCTGAGTGATCGCCAGCAGTGTGCCAGAACGTGCAGCGCCACCATGGCGGTGATCACACCCGATC AAGTAAGGTGCGCGAGCAGT
Downstream 100 bases:
>100_bases GGGTGGCCGGCTCCGCCGATGGGCGGAGTGCGGGCGCTGCATGCGCTGAGCAGTGGGCTGGCTCAGCGTAGGCTGCACGA TGCAGTGCGGACGCGTTGTA
Product: glucose-fructose oxidoreductase
Products: NA
Alternate protein names: GFOR [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MPTLAKEVCMSVESITRRRLLAAFGGAGILLAAPTWAVPKKKPGKPLNVALVGLGSYASEQLAPGLALTKHCKLAGIVTG TPSKIPQWQSKYGIADRNVYSYENFDRIADNDDIDVVYIVTPTHLHAPLTLRAAAAGKHVWCEKPMAMHAGECEAMIAAC KRNKVALTIGYRMQHEPNTRRVIAMASEKPFGAMQRVRAEAGYNGYQGTAKADRPWRLRSQFGGGAMYDMGVYPLNAARY TVGAEPLAVTAKRWTDRPDLFDEVDEHMDFTLEFPNAVRAECKTSFGKNMNVLRAECERGWYELSPFQSYQGVTGKASDG RVFDAKVPHQQALQMDEDALAIMNGTPLRAPGEEGLRDIRIVDAIYRSAREGSKRIVL
Sequences:
>Translated_378_residues MPTLAKEVCMSVESITRRRLLAAFGGAGILLAAPTWAVPKKKPGKPLNVALVGLGSYASEQLAPGLALTKHCKLAGIVTG TPSKIPQWQSKYGIADRNVYSYENFDRIADNDDIDVVYIVTPTHLHAPLTLRAAAAGKHVWCEKPMAMHAGECEAMIAAC KRNKVALTIGYRMQHEPNTRRVIAMASEKPFGAMQRVRAEAGYNGYQGTAKADRPWRLRSQFGGGAMYDMGVYPLNAARY TVGAEPLAVTAKRWTDRPDLFDEVDEHMDFTLEFPNAVRAECKTSFGKNMNVLRAECERGWYELSPFQSYQGVTGKASDG RVFDAKVPHQQALQMDEDALAIMNGTPLRAPGEEGLRDIRIVDAIYRSAREGSKRIVL >Mature_377_residues PTLAKEVCMSVESITRRRLLAAFGGAGILLAAPTWAVPKKKPGKPLNVALVGLGSYASEQLAPGLALTKHCKLAGIVTGT PSKIPQWQSKYGIADRNVYSYENFDRIADNDDIDVVYIVTPTHLHAPLTLRAAAAGKHVWCEKPMAMHAGECEAMIAACK RNKVALTIGYRMQHEPNTRRVIAMASEKPFGAMQRVRAEAGYNGYQGTAKADRPWRLRSQFGGGAMYDMGVYPLNAARYT VGAEPLAVTAKRWTDRPDLFDEVDEHMDFTLEFPNAVRAECKTSFGKNMNVLRAECERGWYELSPFQSYQGVTGKASDGR VFDAKVPHQQALQMDEDALAIMNGTPLRAPGEEGLRDIRIVDAIYRSAREGSKRIVL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI87082405, Length=177, Percent_Identity=26.5536723163842, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581117, Length=185, Percent_Identity=28.1081081081081, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008354 - InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 - InterPro: IPR006311 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.99.28 [H]
Molecular weight: Translated: 41619; Mature: 41488
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLAKEVCMSVESITRRRLLAAFGGAGILLAAPTWAVPKKKPGKPLNVALVGLGSYASE CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHH QLAPGLALTKHCKLAGIVTGTPSKIPQWQSKYGIADRNVYSYENFDRIADNDDIDVVYIV HHCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCCCCCCEECCCCHHHHCCCCCCEEEEEE TPTHLHAPLTLRAAAAGKHVWCEKPMAMHAGECEAMIAACKRNKVALTIGYRMQHEPNTR CCCCCCCCEEEEECCCCCCEEECCCHHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC RVIAMASEKPFGAMQRVRAEAGYNGYQGTAKADRPWRLRSQFGGGAMYDMGVYPLNAARY EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHCCCCEEEECCCEEECCCEE TVGAEPLAVTAKRWTDRPDLFDEVDEHMDFTLEFPNAVRAECKTSFGKNMNVLRAECERG EECCCCEEEEHHHCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHCC WYELSPFQSYQGVTGKASDGRVFDAKVPHQQALQMDEDALAIMNGTPLRAPGEEGLRDIR CEECCCCHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH IVDAIYRSAREGSKRIVL HHHHHHHHHHCCCCCCCC >Mature Secondary Structure PTLAKEVCMSVESITRRRLLAAFGGAGILLAAPTWAVPKKKPGKPLNVALVGLGSYASE CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHH QLAPGLALTKHCKLAGIVTGTPSKIPQWQSKYGIADRNVYSYENFDRIADNDDIDVVYIV HHCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCCCCCCEECCCCHHHHCCCCCCEEEEEE TPTHLHAPLTLRAAAAGKHVWCEKPMAMHAGECEAMIAACKRNKVALTIGYRMQHEPNTR CCCCCCCCEEEEECCCCCCEEECCCHHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC RVIAMASEKPFGAMQRVRAEAGYNGYQGTAKADRPWRLRSQFGGGAMYDMGVYPLNAARY EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHCCCCEEEECCCEEECCCEE TVGAEPLAVTAKRWTDRPDLFDEVDEHMDFTLEFPNAVRAECKTSFGKNMNVLRAECERG EECCCCEEEEHHHCCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHCC WYELSPFQSYQGVTGKASDGRVFDAKVPHQQALQMDEDALAIMNGTPLRAPGEEGLRDIR CEECCCCHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH IVDAIYRSAREGSKRIVL HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537789; 8472911; 8994968 [H]