| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gnl [H]
Identifier: 21241657
GI number: 21241657
Start: 1048346
End: 1049206
Strand: Reverse
Name: gnl [H]
Synonym: XAC0887
Alternate gene names: 21241657
Gene position: 1049206-1048346 (Counterclockwise)
Preceding gene: 21241659
Following gene: 21241656
Centisome position: 20.27
GC content: 64.23
Gene sequence:
>861_bases TTGTCCAGTTCGCTCGCCATCGCTGCCGACAAACCGTTCGTTGCGCGCGATCTGATCGGCGATGGCGCATTCACGCACAA TGCCGAAGGCCCGGCGACTGGTCCGGATGGCGCGCTGTACGCGGTGAACCTGGGCAAGGACGGCACCATCGCGCGCATTG CGCTGCAGGCGGACGGCAGCGCACGTGCCGAGGTGTTCGTCACCTTGCCCGAGGGAAGCACCGGCAATGGCATCCGCTTT CGCGACGGCACCATGTATGTCGCCGATTACACCGGCCACAAGATCCTGCAGGTCAACATGCAGACGCGCGCGGTGAGTAC GTTCGCGGCGTTGCCCGAGGCAGATGGCCCCAACGATCTGGCGCTGGCGCCCGATGGCAGCTTCTACGCCAGCGATCCGA ACTGGAAGGACAATAGCGGGCGCTTGTGGCACATCGGTCGCAACGGCGGGGTGCGGCTGCTGGAAGCAGGGATGACCACA CCCAACGGCCTGGACGTCAGCCCCGACGGCAAACAGCTGTATGTCAACGAAAGTATGTCGCGCAAGGTGTGGGTCTACGA CCGCGGCAGCGACGGCGGCCTGCGCAACAAACGGCTGCTGATCAGCTTTCCCGATTTCGGCATGGACGGCATGCGCTGCG ATGCCGACGGCAATCTGTACATCGCCCGCTACGATGCCGGGAAAATTGCAGTGGTGTCGCCGCAGGGCAAGCTGCTGCGC ACGGTTGCATTGAAGGGGCGCAAGGCCAGCAACGTGGCCTTCGGCGGCGCAGACGGAAAGCAGGTGTTCGTCACCTTGCA GGACCGTGGCGCAGTTGAAACGTTCAGGTCCGATCGTCGCGGGCGCGAAACCGGACACTGA
Upstream 100 bases:
>100_bases ATGGTGGCGCTGCACGTTCTGGCACACTGCTGGCGATCACTCAGGAGCATTGCGCATGACCGTCGTTGCCCATCTTGGCC GTTTGCCGCTGGCGCTGCTG
Downstream 100 bases:
>100_bases AACTGGCGTGTGCGTCGCATTGGTTCTCAGGCCGCGCAACAGCGTGATGGCATCCTGCAGGTCACCTGTGGAGGACTCCC CATGCAACCGATCGAATTGA
Product: gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSSSLAIAADKPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGSARAEVFVTLPEGSTGNGIRF RDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNSGRLWHIGRNGGVRLLEAGMTT PNGLDVSPDGKQLYVNESMSRKVWVYDRGSDGGLRNKRLLISFPDFGMDGMRCDADGNLYIARYDAGKIAVVSPQGKLLR TVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH
Sequences:
>Translated_286_residues MSSSLAIAADKPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGSARAEVFVTLPEGSTGNGIRF RDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNSGRLWHIGRNGGVRLLEAGMTT PNGLDVSPDGKQLYVNESMSRKVWVYDRGSDGGLRNKRLLISFPDFGMDGMRCDADGNLYIARYDAGKIAVVSPQGKLLR TVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH >Mature_285_residues SSSLAIAADKPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGSARAEVFVTLPEGSTGNGIRFR DGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDLALAPDGSFYASDPNWKDNSGRLWHIGRNGGVRLLEAGMTTP NGLDVSPDGKQLYVNESMSRKVWVYDRGSDGGLRNKRLLISFPDFGMDGMRCDADGNLYIARYDAGKIAVVSPQGKLLRT VALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 30502; Mature: 30370
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLAIAADKPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGS CCCCEEEEECCCCHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC ARAEVFVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDL CCEEEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEEHHHEEEHHHHCCCCCCCCCE ALAPDGSFYASDPNWKDNSGRLWHIGRNGGVRLLEAGMTTPNGLDVSPDGKQLYVNESMS EECCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCEEEEECCCC RKVWVYDRGSDGGLRNKRLLISFPDFGMDGMRCDADGNLYIARYDAGKIAVVSPQGKLLR CEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCEEE TVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH EEEECCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCC >Mature Secondary Structure SSSLAIAADKPFVARDLIGDGAFTHNAEGPATGPDGALYAVNLGKDGTIARIALQADGS CCCEEEEECCCCHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC ARAEVFVTLPEGSTGNGIRFRDGTMYVADYTGHKILQVNMQTRAVSTFAALPEADGPNDL CCEEEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEEHHHEEEHHHHCCCCCCCCCE ALAPDGSFYASDPNWKDNSGRLWHIGRNGGVRLLEAGMTTPNGLDVSPDGKQLYVNESMS EECCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCEEEEECCCC RKVWVYDRGSDGGLRNKRLLISFPDFGMDGMRCDADGNLYIARYDAGKIAVVSPQGKLLR CEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCEEE TVALKGRKASNVAFGGADGKQVFVTLQDRGAVETFRSDRRGRETGH EEEECCCCCCCEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]