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The map label for this gene is visC [H]

Identifier: 21241643

GI number: 21241643

Start: 1034876

End: 1036072

Strand: Direct

Name: visC [H]

Synonym: XAC0873

Alternate gene names: 21241643

Gene position: 1034876-1036072 (Clockwise)

Preceding gene: 21241642

Following gene: 21241644

Centisome position: 20.0

GC content: 69.67

Gene sequence:

>1197_bases
GTGCCGGAGCAGCGCATGAGCCGGCGCAGCACGCGCGAGGCCGTGATCGTCGGCGGCGGCGTTGTCGGCGCGGCCTGCGC
GCTGGCGTTGAACGATGCCGGGCTGAGCGTTGCCCTGGTCGAAGGGCGCGAGCCTGCACGCTGGCACGCCGATCAACCCG
ATCTGCGCGTCTATGCCTTCGCCGCCGACAACGCCGCGTTGCTCGACAGCCTGGGCGTGTGGAATGCGGTGCGTGCCGCC
CGCGTGCAGCCTTACCGGCGCATGCGGGTCTGGGATGCTGGCGGAGGCGGAGAGCTGGGCTTCGATGCCGACACGCTGGG
ACGCGAGCAACTGGGCTGGATCATCGAAAACGACGTGCTGGTGGACCGCTTGTGGGCCGCCGTGCATGCGGCCGGCATCC
AAGTGCATTGCCCGGCACGCGTGGTCGAGCTGGAGCAGGACGCTGCCAGCGTGCGCCTGCGCCTGGACGATGGCAGCCGG
CTGGAAGCGGCAATGGCCATTGCCGCCGATGGTGCAGCATCCACCCTGCGCGAACTCGCCGGGCTGCCGGTCTCCCGGCA
TGCCTACGCACAGCGCGGCGTGGTCGCCTTCGTGGAAACCGAACACCCGCATCAGGCCACCGCCTGGCAGCGCTTCCTGA
CGACCGGGCCGCTGGCCTTCCTGCCGTTCGCCGATGGCCGCAGTTCGATCGTGTGGACCTTGCCGGATGCCGACGCCGAG
CGCGTGCTGGCGCTGGACGATGCCGATTTCTCGCGGGAGTTGACCCAGGCCTTCGCGGCGCGCCTGGGCGAGGTACGCGT
GGTGTCGGCACGCACCGCCTTCCCGCTGCAACGGCAATTGGTGCAGCAGTACGTCAGCGGCCGCGTGCTGACCCTGGGCG
ATGCCGCGCATGTGGTGCATCCGCTGGCCGGGCAGGGCGTCAACCTGGGCCTGCGCGATGTGGCGGCGTTGCGGCAGAGC
GTGCGCGAGGCGATGGCCAAACGTGCCGATTGGGCCGCGCCGCATCGCCTGCAACGCTGGGCACGTACCCGGCGCAGCGA
GAACACCGTTGCCGCCTACGGCTTCGATGCGATCAATACGGTGTTTTCCAACGACGAAATGCACCTGACGTTGTTGCGCG
GATCGGTATTGGGCCTGGCCGGCAAGTTGCCGCCGTTGGTCGATGTGCTGTGGAAGCGCGCCTCCGGCGGCGCGTGA

Upstream 100 bases:

>100_bases
CGTTGCGTAGCCTGGGCTTGTTTGCGACCTCGCAGGCGGCCCCGCTGCAATCGATGCTGGTGGGCGGTGCCATGGGCTTC
CGTGGCGATGTGCCGCAACT

Downstream 100 bases:

>100_bases
GCCAATCGCGCCAGCCGCCGCAATCGGCGTCGGCGGCTGCCTGTCATGCCTTGATATGCCTTTGATGCTATAGCGAAGGC
AGCAGGTTCCATACGACGTG

Product: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPEQRMSRRSTREAVIVGGGVVGAACALALNDAGLSVALVEGREPARWHADQPDLRVYAFAADNAALLDSLGVWNAVRAA
RVQPYRRMRVWDAGGGGELGFDADTLGREQLGWIIENDVLVDRLWAAVHAAGIQVHCPARVVELEQDAASVRLRLDDGSR
LEAAMAIAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEHPHQATAWQRFLTTGPLAFLPFADGRSSIVWTLPDADAE
RVLALDDADFSRELTQAFAARLGEVRVVSARTAFPLQRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQS
VREAMAKRADWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDEMHLTLLRGSVLGLAGKLPPLVDVLWKRASGGA

Sequences:

>Translated_398_residues
MPEQRMSRRSTREAVIVGGGVVGAACALALNDAGLSVALVEGREPARWHADQPDLRVYAFAADNAALLDSLGVWNAVRAA
RVQPYRRMRVWDAGGGGELGFDADTLGREQLGWIIENDVLVDRLWAAVHAAGIQVHCPARVVELEQDAASVRLRLDDGSR
LEAAMAIAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEHPHQATAWQRFLTTGPLAFLPFADGRSSIVWTLPDADAE
RVLALDDADFSRELTQAFAARLGEVRVVSARTAFPLQRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQS
VREAMAKRADWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDEMHLTLLRGSVLGLAGKLPPLVDVLWKRASGGA
>Mature_397_residues
PEQRMSRRSTREAVIVGGGVVGAACALALNDAGLSVALVEGREPARWHADQPDLRVYAFAADNAALLDSLGVWNAVRAAR
VQPYRRMRVWDAGGGGELGFDADTLGREQLGWIIENDVLVDRLWAAVHAAGIQVHCPARVVELEQDAASVRLRLDDGSRL
EAAMAIAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEHPHQATAWQRFLTTGPLAFLPFADGRSSIVWTLPDADAER
VLALDDADFSRELTQAFAARLGEVRVVSARTAFPLQRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQSV
REAMAKRADWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDEMHLTLLRGSVLGLAGKLPPLVDVLWKRASGGA

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=387, Percent_Identity=30.4909560723514, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI32967307, Length=353, Percent_Identity=30.028328611898, Blast_Score=135, Evalue=6e-32,
Organism=Escherichia coli, GI1789273, Length=388, Percent_Identity=38.9175257731959, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1786883, Length=376, Percent_Identity=38.8297872340425, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1789274, Length=386, Percent_Identity=33.6787564766839, Blast_Score=190, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI25146631, Length=435, Percent_Identity=28.9655172413793, Blast_Score=168, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6321694, Length=455, Percent_Identity=23.7362637362637, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19920760, Length=418, Percent_Identity=29.1866028708134, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43040; Mature: 42909

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEQRMSRRSTREAVIVGGGVVGAACALALNDAGLSVALVEGREPARWHADQPDLRVYAF
CCCHHHHHHCCCCEEEECCCHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCEEEEEE
AADNAALLDSLGVWNAVRAARVQPYRRMRVWDAGGGGELGFDADTLGREQLGWIIENDVL
ECCCHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHCCHHHCCEEEECHHH
VDRLWAAVHAAGIQVHCPARVVELEQDAASVRLRLDDGSRLEAAMAIAADGAASTLRELA
HHHHHHHHHHCCEEEECCHHEEEECCCCEEEEEEECCCCCHHHHHEEECCCHHHHHHHHH
GLPVSRHAYAQRGVVAFVETEHPHQATAWQRFLTTGPLAFLPFADGRSSIVWTLPDADAE
CCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCC
RVLALDDADFSRELTQAFAARLGEVRVVSARTAFPLQRQLVQQYVSGRVLTLGDAAHVVH
EEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHH
PLAGQGVNLGLRDVAALRQSVREAMAKRADWAAPHRLQRWARTRRSENTVAAYGFDAINT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECHHHHHH
VFSNDEMHLTLLRGSVLGLAGKLPPLVDVLWKRASGGA
HHCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PEQRMSRRSTREAVIVGGGVVGAACALALNDAGLSVALVEGREPARWHADQPDLRVYAF
CCHHHHHHCCCCEEEECCCHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCEEEEEE
AADNAALLDSLGVWNAVRAARVQPYRRMRVWDAGGGGELGFDADTLGREQLGWIIENDVL
ECCCHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHCCHHHCCEEEECHHH
VDRLWAAVHAAGIQVHCPARVVELEQDAASVRLRLDDGSRLEAAMAIAADGAASTLRELA
HHHHHHHHHHCCEEEECCHHEEEECCCCEEEEEEECCCCCHHHHHEEECCCHHHHHHHHH
GLPVSRHAYAQRGVVAFVETEHPHQATAWQRFLTTGPLAFLPFADGRSSIVWTLPDADAE
CCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCC
RVLALDDADFSRELTQAFAARLGEVRVVSARTAFPLQRQLVQQYVSGRVLTLGDAAHVVH
EEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECCHHHHHH
PLAGQGVNLGLRDVAALRQSVREAMAKRADWAAPHRLQRWARTRRSENTVAAYGFDAINT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECHHHHHH
VFSNDEMHLTLLRGSVLGLAGKLPPLVDVLWKRASGGA
HHCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]