Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is yuxL [H]

Identifier: 21241575

GI number: 21241575

Start: 955694

End: 958228

Strand: Direct

Name: yuxL [H]

Synonym: XAC0805

Alternate gene names: 21241575

Gene position: 955694-958228 (Clockwise)

Preceding gene: 21241573

Following gene: 21241576

Centisome position: 18.47

GC content: 67.89

Gene sequence:

>2535_bases
ATGCGGGCGAAACGGCATGCGCAAGGCTGGCGGCAGCACACATGGGCGTTGGCAGGGGCGCTGGCATTGAGCGCACCGAT
GATGGCCGGGGCGGCTAGCCCGGCAGTGACCAAGGTGGCAGTCGTGCAACCAGGCCCTGCGTCAGGCAGCGGTTATCAAC
TTCCCTCCAAGGCGCTGCAGGCGGTGGTGGACGCCCCGCGCGCGCCGCTGCTGCAGCTCTCGCCCAGGCGCGATCTGGCC
GCGATGCTGCAACTGCCGGCACTGCCGGACATCGCCGAGGTGGCCCAGCCGGAGCTGAAGCTGGCCGGCCTGCGCATCCA
TCCGAAGACCTTCGCGGCCAGCCGCTTTTCGTTCGCCAGCAAGCTGTGGCTGCTGTCGGTGGCCGACGGCAGCGAGCGGC
AGATCGCCGGGTTGCCCTCGCCGTTGTCGCTGGCCGATTTGAGCTGGTCGCCCGACCAACGCCATCTGGCGTTCCGCCGC
GAAGACGCCGCCAGCGGCGCCAACGAACTGTGGCTGGTAGACGTGGCGACCGGGCAGGCGCGGCGTCTGGTGGCCGGCTT
GAACACCAGCGTCAACGACGACTTGCGTTGGTTGCCCGATGGCAGCGGTTTGCTGCTGCAGCAGCAGGTCGCCGGGCAGG
GCGCGCCACCGACCCGCGATGCGACGCCGACCGGCCCGGCTACCCAGCAGACCAGTGCGGCCGCCGGGGTGCGCTCGCTG
CCCACCTACCAGGACCTGCTGCGCAGCGAGGCCGATGCGCGCGTGTTCGAGTACTACGCCACCGGTCAGCCGATCATCGT
CACGGTGGCCGGGCAGGTACGTCCGATCGCCACGCCGGGCATCTATCTCAACCTGTCGGTGTCGCCGGATGGCCGTTACA
TCCTGAGCGAACGCAGCGAGCGGCCGTTCTCGTATCTGGTGCCGGTAGACAACTTCGCGCGCCGCATCGAGGTGCTGGAC
CTGCAGGGCAAACTGGTGCGCCAGATCGCGCAGCTGCCGTTGGTGGAAGGCTTGCCGACCGGTAACGACGCGGTGCCGAC
CGGGGTGCGCGACATCGCCTGGCGGCACGATGCGCCGGCCACGCTGGTGTGGGCCGAAGCGCAGGACGGTGGCGACCCGG
CACGCGAGAGCAAGGTCCGCGATGCGGTGCGGATGCAGGCCGCGCCGTTCAACCGCGCACCGGTGACGCTGGCGCAGTTG
GGCAGCCGGTTCGAAGGCATCCAGTGGGGCCGCGGCGATCTGGCGATCTTGAGCGAAAGCTGGTGGAAGACCCGCCGCAC
CAAGCAATGGCGCATCGCACCGGATCAACCGCAACGCGCGCCCGAACTGCTGTGGGACCGCTCCTCGCAGGACCGCTACA
AGGACCCGGGCACGCCGGCGACGGTGGCCGACGGCAACGGCCGCCCGCTGCTGCAGACCAGCAGCGATGGCAACAGCCTG
TTCCTGTTCGGCAAGGGCGCTTCGCCGGAAGGCGACCGCCCGTTCGTGGATCGATTCGATCTGCGCAGCAAGCAGGCCAC
GCGGCTGTTCCACTCGCAGGCGCCGACCTATTCGGCACCGCTGGCCTTGTTGGACGCGCAGGCCACGCAACTGCTGCTCA
GCCGCGAATCGCCGGAGGAACCGGCCAACTATGTCGTGCAACCGCTGGGCGATGGCGCCGCCGCCGCGCGCGCGTTGACG
CACTTCGCACACCCGCTGCCGCAATTGCGCGGCGTGCAGAAGGAGCAGATCCGCTACAAGCGTGCCGACGGCGTGGAACT
CACCGCCACACTCTTGCTGCCACCTGGTTACGACCCCAAGCGCGATGGCCCACGGCCGTTGCTGATGTGGGCCTACCCGG
GCGAATTCAAAAGCGCCGACACCGCCAGCCAGGTCACCGACTCGCCGTACCGTTTCAACGCGATCAGTTACTGGGGGCCG
CAGGCGTTTCTGGCGATCGGCTATGTGGTGCTCAACAACCCGAGCACGCCGATCGTGGGCGAAGGCGATGCAGAACCCAA
CGACACCTATGTGCCGCAGCTGATCGCCGATGCGCAGGCGGCCGTGGACGAAGTGGTGCGGCGCGGCGTCACCGACCGCG
AGCACATCGCCATCGGCGGGCATTCCTACGGTGCCTTCATGACCGCCAACCTGCTCGCGCACACGCGCCTGTTCAAGGCC
GGCATCGCACGCAGCGGCGCCTACAACCGCACGCTCACCCCGTTCGGTTTCCAGGCCGAAGAGCGCAATTACTGGCAGGC
GCAATCGGTGTACCAGGCGATGTCGCCATTCAATTACGCCGACAAGATCAAGGATCCGCTGCTGCTGATCCACGGCCAGG
ACGACAACAATACCGGCACCTTCCCGATCCAGAGCGAGCGCATGTTCGCTGCGATCAAGGGACTGGGCGGGACTGCGCGC
CTGGTCCTGTTGCCCAACGAATCGCATGCGTACCGCGCGCGGCAATCGATCATGCAGATGCTGGCCGAAAGCGAGCAGTG
GTTGAAGACCAATGTCGGCGATCCCGCGCAGGCGGAAGTGCCGTCCAAGCGTTGA

Upstream 100 bases:

>100_bases
CCCGTGCGGCATGAATTGCGGCCGACCCCCTACCAACGGCAGGGGAGCGGCCGACAGGCGGCTGCTATGGTCCGGAGTCG
ATCATCAGCGGGGACGGACA

Downstream 100 bases:

>100_bases
TCGTCGTCGCACGCAATGCGGTGCGAACGCAACGCGGATCGTCGCACCTACGCATTGCTTGCCGGTGCCGGGTGACGGAT
TCCAATGGCGCGCACGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 844; Mature: 844

Protein sequence:

>844_residues
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA
AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR
EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL
PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD
LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL
GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL
FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT
HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP
QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA
GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR
LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR

Sequences:

>Translated_844_residues
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA
AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR
EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL
PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD
LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL
GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL
FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT
HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP
QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA
GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR
LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR
>Mature_844_residues
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA
AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR
EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL
PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD
LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL
GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL
FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT
HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP
QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA
GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR
LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 91880; Mature: 91880

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH
AVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFAS
HHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHHC
KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVATGQA
EEEEEEECCCCCCEECCCCCCCCEECCCCCCCHHHHHEECHHHCCCCCCEEEEEECCCCH
RRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL
HHHHHHCCCCCCCCCEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHCC
PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE
CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEECCCEEEEEEECCCCCEEECCCCC
RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPA
CCEEEECCHHHHHHEEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCCCCC
TLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQLGSRFEGIQWGRGDLAILSES
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECHH
WWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL
HHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEE
FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEE
EEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PANYVVQPLGDGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK
CHHHHEECCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCC
RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVVLNNPSTPIVG
CCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHEEEEEECCCCCCEEE
EGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGT
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCC
FPIQSERMFAAIKGLGGTARLVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEV
CEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC
PSKR
CCCC
>Mature Secondary Structure
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH
AVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFAS
HHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHHC
KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVATGQA
EEEEEEECCCCCCEECCCCCCCCEECCCCCCCHHHHHEECHHHCCCCCCEEEEEECCCCH
RRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL
HHHHHHCCCCCCCCCEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHCC
PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE
CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEECCCEEEEEEECCCCCEEECCCCC
RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPA
CCEEEECCHHHHHHEEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCCCCC
TLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQLGSRFEGIQWGRGDLAILSES
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECHH
WWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL
HHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEE
FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEE
EEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PANYVVQPLGDGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK
CHHHHEECCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCC
RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVVLNNPSTPIVG
CCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHEEEEEECCCCCCEEE
EGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGT
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCC
FPIQSERMFAAIKGLGGTARLVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEV
CEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC
PSKR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]