Click here to switch to the map view.

The map label for this gene is rmrB

Identifier: 21241413

GI number: 21241413

Start: 756230

End: 757879

Strand: Reverse

Name: rmrB

Synonym: XAC0642

Alternate gene names: NA

Gene position: 757879-756230 (Counterclockwise)

Preceding gene: 21241425

Following gene: 21241412

Centisome position: 14.64

GC content: 66.85

Gene sequence:

>1650_bases
GTGCGCGACAAGTACGTCCAGCGCGACTGGCAGCCCCATGAGCGGCCCACCCTGCCGGGGTCGGCCTCCACCCCCCTGCA
CCCTACCCGGCGGCGGATCCAGTACGGCCTGGTGGGCGTGGTGGTGGCGCTCACCGGCGGGCTGAGCAATGCCCTGGTCA
CCGCCAACCTGACCTATCTGCAAGGCACCTTGGGCGCCTATGCCACCGAAATGGCCTGGCTGCCGGCCGCCTACGTGATG
ACCAACATGTCGGCGAACCTGCTGCTGGTAAAGTTTCGCCAGCAGTTCGGGCTGCGCCGGTTCACCGAAATCTTCCTGGC
GCTGTACGCGCTCATCGCCTTCGCGCATCTGTTCGTGCACAGCCTGAGCTCGGCGATCACCGTGCGCGCCGCGCATGGCT
TGGTGGGCGCCGCGCTCAGCTCGCTGGGCCTGTACTACGTGATCCAGGCATTTCCAACGAAATACCGGCTCAAGGCCGTG
GTGCTGGGCCTGGGCATGACCCAACTGGCGTTGCCGCTGGCGCGGGTGTTTTCCACCGACCTGCTGGAATTTGGCGAGTG
GCAAGGCCTGTACCTGTTCGAGTGCGGGCTGGCGGTGTTCGCGCTGGCCTGCGTGCTGGCGCTCAAGTTACCGCCGAGCG
ACCGGTATCGCGTGTTCGAGCCGCTGGATTTCCTCACCTTCAGTCTGTTCGCCGCAGGCGCCGCCGGCATGGCCGCGGTG
CTCTCGCTCGGGCGCCTGCTGTGGTGGACCAGTACGCCGTGGCTGGGCGTGGTGCTGGCCGCATCCATCGTGCTGCTGTG
CACGGCGGCCTGGATCGAACACAACCGCCGCAATCCGATGATCAACACGCGCTGGCTGGCCAGTGCGGACATGTTGCGGC
TGGGGCTGGCGATTCTGTTGATCCGGCTGGTGCTGTCCGAACAAAGCACCGGCGCCATCGGCTTCTTCCAGACGCTGGGC
CTGGCCAACACGCAACTGCAGACCCTGTTCGCGCTGATGCTGCTGGGCGCAGTGGTCGGCGTGGCGGCCAGCGCGTGGCT
GATCAACCCGGCGCGGGTTGCCGAACATCTGATCATCGCGGTGGCGGCCATCTGTACCGGCTGCTTCATGGATGCCGATG
CCACCAGCCTCACCCGCCCCGAGCAGATGTATGCGAGCCAGTTCCTGCTCGCCTTCGGCAGCACGTTCTTCATCGGCCCG
GCGATGGTGGCCGGCATCGGCCGGGTGATCGCGCAGCCGGGCAACCTGATCAGTTTCATCGTGCTGTTCGGCATGGCGCA
AAACATGGGCGGCCTGCTCGGCAGCGCCCTGCTCGGCACCGTGCAGGTGGTGCGCGAGAAATACCATTCCAGCCAGTTGG
TGGAACATCTGGTGCTGACCGACCCGCAGGTGGCCGCGCGCGTGCAGGCCTATGCAAGCCTGTATGGCCGCAGCATCGGC
GACCCGGCACTGCGTCAGGCCCAAGGCGTGCGCACGCTGGGCACCGTCGCCACGCGCGAGGCCAATGTGCTGGCGTACAA
CGACGTGTTCCTGTTGATCGGCTGCATCGCCATCGCCACCGGCGTGTGGATCCTGTCCGTGCTGGTGTGGCGCCGCTATC
TGCGGCCCTCGGTATCGCCCTCCCCTCCTGCTCCCACTGCGCGCCCATGA

Upstream 100 bases:

>100_bases
GGGATTCGCTCATGGGCGGATTATCGCACCGCTGACGCCACCATGACCGCAACCGGACCACAATCGCGTTTTCACCTCCG
ACCGGCCCTGCGAGCATTCA

Downstream 100 bases:

>100_bases
ATACACCAGCAGATTCCTCCCCGCCTGCCGACCGGCAACGTCGTCGGCGTCGCCGTCTCGCCGGGGTCATTGGCTTCGGC
GGGCTCGCCCTGATCGGCGT

Product: MFS transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transport Protein Transmembrane; Facilitator Superfamily Transporter; MFS Drug Efflux Transporter RmrB; EmrB/QacA Family Drug Resistance Transporter; EmrB/QacA Subfamily Drug Resistance Transporter; MFS Drug Efflux Transporter; MFS Permease; LOW QUALITY PROTEIN MFS Drug Efflux Transporter; Efflux Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter Protein; Multidrug Resistance Protein B; MFS Family Transporter; HlyD Family Protein; Facilitator Family Transporter; Transmembrane Efflux Pump Protein; Tat Pathway Signal Sequence Domain Protein; Facilitator Superfamily Permease

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MRDKYVQRDWQPHERPTLPGSASTPLHPTRRRIQYGLVGVVVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM
TNMSANLLLVKFRQQFGLRRFTEIFLALYALIAFAHLFVHSLSSAITVRAAHGLVGAALSSLGLYYVIQAFPTKYRLKAV
VLGLGMTQLALPLARVFSTDLLEFGEWQGLYLFECGLAVFALACVLALKLPPSDRYRVFEPLDFLTFSLFAAGAAGMAAV
LSLGRLLWWTSTPWLGVVLAASIVLLCTAAWIEHNRRNPMINTRWLASADMLRLGLAILLIRLVLSEQSTGAIGFFQTLG
LANTQLQTLFALMLLGAVVGVAASAWLINPARVAEHLIIAVAAICTGCFMDADATSLTRPEQMYASQFLLAFGSTFFIGP
AMVAGIGRVIAQPGNLISFIVLFGMAQNMGGLLGSALLGTVQVVREKYHSSQLVEHLVLTDPQVAARVQAYASLYGRSIG
DPALRQAQGVRTLGTVATREANVLAYNDVFLLIGCIAIATGVWILSVLVWRRYLRPSVSPSPPAPTARP

Sequences:

>Translated_549_residues
MRDKYVQRDWQPHERPTLPGSASTPLHPTRRRIQYGLVGVVVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM
TNMSANLLLVKFRQQFGLRRFTEIFLALYALIAFAHLFVHSLSSAITVRAAHGLVGAALSSLGLYYVIQAFPTKYRLKAV
VLGLGMTQLALPLARVFSTDLLEFGEWQGLYLFECGLAVFALACVLALKLPPSDRYRVFEPLDFLTFSLFAAGAAGMAAV
LSLGRLLWWTSTPWLGVVLAASIVLLCTAAWIEHNRRNPMINTRWLASADMLRLGLAILLIRLVLSEQSTGAIGFFQTLG
LANTQLQTLFALMLLGAVVGVAASAWLINPARVAEHLIIAVAAICTGCFMDADATSLTRPEQMYASQFLLAFGSTFFIGP
AMVAGIGRVIAQPGNLISFIVLFGMAQNMGGLLGSALLGTVQVVREKYHSSQLVEHLVLTDPQVAARVQAYASLYGRSIG
DPALRQAQGVRTLGTVATREANVLAYNDVFLLIGCIAIATGVWILSVLVWRRYLRPSVSPSPPAPTARP
>Mature_549_residues
MRDKYVQRDWQPHERPTLPGSASTPLHPTRRRIQYGLVGVVVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM
TNMSANLLLVKFRQQFGLRRFTEIFLALYALIAFAHLFVHSLSSAITVRAAHGLVGAALSSLGLYYVIQAFPTKYRLKAV
VLGLGMTQLALPLARVFSTDLLEFGEWQGLYLFECGLAVFALACVLALKLPPSDRYRVFEPLDFLTFSLFAAGAAGMAAV
LSLGRLLWWTSTPWLGVVLAASIVLLCTAAWIEHNRRNPMINTRWLASADMLRLGLAILLIRLVLSEQSTGAIGFFQTLG
LANTQLQTLFALMLLGAVVGVAASAWLINPARVAEHLIIAVAAICTGCFMDADATSLTRPEQMYASQFLLAFGSTFFIGP
AMVAGIGRVIAQPGNLISFIVLFGMAQNMGGLLGSALLGTVQVVREKYHSSQLVEHLVLTDPQVAARVQAYASLYGRSIG
DPALRQAQGVRTLGTVATREANVLAYNDVFLLIGCIAIATGVWILSVLVWRRYLRPSVSPSPPAPTARP

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59384; Mature: 59384

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA