| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phS
Identifier: 21241379
GI number: 21241379
Start: 714320
End: 715327
Strand: Reverse
Name: phS
Synonym: XAC0608
Alternate gene names: NA
Gene position: 715327-714320 (Counterclockwise)
Preceding gene: 21241380
Following gene: 21241376
Centisome position: 13.82
GC content: 66.67
Gene sequence:
>1008_bases ATGGCGGCATCCACGCCGCGTTGCCGGCGCTGCCGGTATCCTTGCGGCTTTCGCGTTCGCGCTTGCCTGGCTTATTCGAT GAAAGACATGCCCGTGGCTGACGAAGCCTCTCGCCAACACGTTCTGGACGGCTATCGCATCGTCGACAGCCTGCCAGAGG ACACCTATCAAGACGTCGTGCAGGTTGCCGCCTCTCTGTGCGACACACCGATCGCGCTGATGTCGCTGGTGGACCGCGAC CGCCAATGGTTCAAGGCGCAACTGGGTCTGGGCGTGCAGCAGACCGACCGCAGCCAGGCGGTGTGCGACCACGCCATCCG CAGCCCCGAGCAGCTGATGGAAGTGCCGGACCTGCGCGAGGACAGCCGGTTTGCCGATATCTCGGTGGTCACCGGCGACA CCGGCGCGCGGTTCTATGCCGGCATGCCGCTGGTCACCTCCGATGGTGTGGCATTGGGTACGGTCTGCGTGCTCGACACC GAGCCACGCACGCTCACCGAGTTGCAGCGCACCGGCCTGCAGGCGCTTGCACGGGTGGCCATGCGTCTGCTCGACGAGCG CAAGCGCGAGCTGCAGCTCGAGCGCGACGCCATCCTGCAGCCGGTTGCCCCGGTCGCCAGCCAGGCCGTCGCAGACACGG GTTATCACCTGGTGATTCTGGAAGTGCAGGAATTGGCCGCACTGGCCGAGCGCCAGAGCGAACGCCTGCTCGGGCGCAAC TTGCAGCAGCTCGACCAGGCGCTCGCGGCCTTGGTGCAGGGGCCAGGCAACAGCATCGACCGTGTCACCGACAGTGCGGA ATTCATCGCCGTGCTGCGCGGCCCCGACGCCGAGCGCACCTTGCAAAGCCTGCGCGAGATCGCCCAGCAACAACATGCCC TGGGCCTGACCGTCTTGTTGGGCCAAGCGCAATCCACTGGCCCGGACGAGCCGATCGGCCAGGTGTTTCTACGCGCCGAG GTCGCGCTGAGCGCAGAGAAGGATCGTTACCGGCAGCGCCTGGCCTGA
Upstream 100 bases:
>100_bases ACCTGTGTTTCGCCAGGGCAGCGCATGCCCACTCGGCAGACAACCACGACGCACGCTGTCGCTGCCATCACGCAGCGTTG GCGTCTCGACCGCTGTCCGC
Downstream 100 bases:
>100_bases GGCCTGCGAACCGATCTACTGCGTCGCAGACGTACCCTCAGCCCAACCCCTCTCCCGCTAGGAGAGGGGCTTTGAAGCGA AGCGCCAGCGCTGAATTGTT
Product: histidine kinase-response regulator hybrid protein
Products: NA
Alternate protein names: Diguanylate Cyclase With GAF Sensor; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase; GAF Sensor Protein; Two-Component Hybrid Sensor And Regulator; Two-Component System Sensor Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Sensor Protein; GAF Domain-Containing Protein; GGDEF Domain-Containing Protein; PAS Sensor Protein; Histidine Kinase Response Regulator Hybrid Protein; Diguanylate Cyclase With PAS/PAC Sensor; Histidine Kinase-Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; Sensory Box/GGDEF Family Protein; Sensor Histidine Kinase; GGDEF Domain Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Histidine Kinase/Response Regulator Hybrid Protein; PAS/PAC Sensor Hybrid Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; Signal Transduction Protein; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Diguanylate Phosphodiesterase With GAF Sensor; Diguanylate Cyclase/Phosphodiesterase; Sensory Transduction Histidine Kinase; Phytochrome Sensor Protein; PAS/PAC Sensor Protein; GGDEF Family Protein; Histidine Kinase Of HWE Family; GAF/PAS-Family Sensor Histidine Kinase; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; Two-Component System Sensor Kinase; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; Pas/Pac Sensor Protein; GAF And Chase3 Sensor Phosphotransfer Protein; Stage II Sporulation E Family Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; GGDEF GAF Signalling Protein; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Sensory Histidine Protein Kinase; Response Regulator; Diguanylate-Cyclase; Signaling Protein; Gaf Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; GGDEF And GAF Signalling Protein; Phosphodiesterase; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Protein Containing GAF Domain; Magnesium Or Manganese-Dependent Protein Phosphatase; GAF Domain Protein; EAL Domain-Containing Protein; Adenylate Cyclase; ATPase Histidine Kinase- DNA Gyrase B- And; Sensor Kinase Protein; Sensor Histidine Kinase/GAF Domain-Containing Protein
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAASTPRCRRCRYPCGFRVRACLAYSMKDMPVADEASRQHVLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRD RQWFKAQLGLGVQQTDRSQAVCDHAIRSPEQLMEVPDLREDSRFADISVVTGDTGARFYAGMPLVTSDGVALGTVCVLDT EPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQPVAPVASQAVADTGYHLVILEVQELAALAERQSERLLGRN LQQLDQALAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTLQSLREIAQQQHALGLTVLLGQAQSTGPDEPIGQVFLRAE VALSAEKDRYRQRLA
Sequences:
>Translated_335_residues MAASTPRCRRCRYPCGFRVRACLAYSMKDMPVADEASRQHVLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRD RQWFKAQLGLGVQQTDRSQAVCDHAIRSPEQLMEVPDLREDSRFADISVVTGDTGARFYAGMPLVTSDGVALGTVCVLDT EPRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQPVAPVASQAVADTGYHLVILEVQELAALAERQSERLLGRN LQQLDQALAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTLQSLREIAQQQHALGLTVLLGQAQSTGPDEPIGQVFLRAE VALSAEKDRYRQRLA >Mature_334_residues AASTPRCRRCRYPCGFRVRACLAYSMKDMPVADEASRQHVLDGYRIVDSLPEDTYQDVVQVAASLCDTPIALMSLVDRDR QWFKAQLGLGVQQTDRSQAVCDHAIRSPEQLMEVPDLREDSRFADISVVTGDTGARFYAGMPLVTSDGVALGTVCVLDTE PRTLTELQRTGLQALARVAMRLLDERKRELQLERDAILQPVAPVASQAVADTGYHLVILEVQELAALAERQSERLLGRNL QQLDQALAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTLQSLREIAQQQHALGLTVLLGQAQSTGPDEPIGQVFLRAEV ALSAEKDRYRQRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36905; Mature: 36774
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASTPRCRRCRYPCGFRVRACLAYSMKDMPVADEASRQHVLDGYRIVDSLPEDTYQDVV CCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH QVAASLCDTPIALMSLVDRDRQWFKAQLGLGVQQTDRSQAVCDHAIRSPEQLMEVPDLRE HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCC DSRFADISVVTGDTGARFYAGMPLVTSDGVALGTVCVLDTEPRTLTELQRTGLQALARVA CCCEEEEEEEECCCCCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH MRLLDERKRELQLERDAILQPVAPVASQAVADTGYHLVILEVQELAALAERQSERLLGRN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCC LQQLDQALAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTLQSLREIAQQQHALGLTVLL HHHHHHHHHHHHCCCCCCHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEE GQAQSTGPDEPIGQVFLRAEVALSAEKDRYRQRLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AASTPRCRRCRYPCGFRVRACLAYSMKDMPVADEASRQHVLDGYRIVDSLPEDTYQDVV CCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH QVAASLCDTPIALMSLVDRDRQWFKAQLGLGVQQTDRSQAVCDHAIRSPEQLMEVPDLRE HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCC DSRFADISVVTGDTGARFYAGMPLVTSDGVALGTVCVLDTEPRTLTELQRTGLQALARVA CCCEEEEEEEECCCCCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH MRLLDERKRELQLERDAILQPVAPVASQAVADTGYHLVILEVQELAALAERQSERLLGRN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCC LQQLDQALAALVQGPGNSIDRVTDSAEFIAVLRGPDAERTLQSLREIAQQQHALGLTVLL HHHHHHHHHHHHCCCCCCHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEE GQAQSTGPDEPIGQVFLRAEVALSAEKDRYRQRLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA