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The map label for this gene is dcm [H]

Identifier: 21241348

GI number: 21241348

Start: 681205

End: 681525

Strand: Direct

Name: dcm [H]

Synonym: XAC0577

Alternate gene names: 21241348

Gene position: 681205-681525 (Clockwise)

Preceding gene: 21241347

Following gene: 21241352

Centisome position: 13.16

GC content: 48.6

Gene sequence:

>321_bases
ATGAAGAAAAAAATTGGCGAGCCTAAAATCAAAATCGCTGGTCCTAGCGTTATTTCGCTTTTCTCCGGCTGTGGCGGAAT
GGACTTCGGGATCAAGGCCGCTGGCGGCAGGATAGTTTTTAGTAACGATATCTTGGCTGATGCATGTAAAACCCTAGAAA
AATATTTCCCGGATTCCACAGTGTCCTGCGGAGACATCGCAGCGCTTCATGAATTTCCTGAAGCCGATGTCGTAGTGGGA
GGATACCCCTGTCAATCCTTCTCAATGGCGGGGAATCGTGATCCAAAAAAGGATGCAAGTGATACGCCCAGGGTTCCGTA
G

Upstream 100 bases:

>100_bases
CGTTTCCCCTTGGTCTCAATCCCCGCGACTCGTAGCCGCCATGCTCGGTATCTGAAAACGGAAATGACACAGTTGCATAA
TCAAAAAAATACAGTAAAAA

Downstream 100 bases:

>100_bases
ACACTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGATCGCCAGTTGAACCATGACGGCGTTGT
GGGTTGTAGAACATCTCGAT

Product: cytosine methyltransferase

Products: NA

Alternate protein names: M.Eco47II; Cytosine-specific methyltransferase Eco47II [H]

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKKKIGEPKIKIAGPSVISLFSGCGGMDFGIKAAGGRIVFSNDILADACKTLEKYFPDSTVSCGDIAALHEFPEADVVVG
GYPCQSFSMAGNRDPKKDASDTPRVP

Sequences:

>Translated_106_residues
MKKKIGEPKIKIAGPSVISLFSGCGGMDFGIKAAGGRIVFSNDILADACKTLEKYFPDSTVSCGDIAALHEFPEADVVVG
GYPCQSFSMAGNRDPKKDASDTPRVP
>Mature_106_residues
MKKKIGEPKIKIAGPSVISLFSGCGGMDFGIKAAGGRIVFSNDILADACKTLEKYFPDSTVSCGDIAALHEFPEADVVVG
GYPCQSFSMAGNRDPKKDASDTPRVP

Specific function: This methylase recognizes the double-stranded sequence GGNCC, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the Eco47II endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018117
- InterPro:   IPR001525
- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00145 DNA_methylase; PF00376 MerR [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 11141; Mature: 11141

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00094 C5_MTASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIGEPKIKIAGPSVISLFSGCGGMDFGIKAAGGRIVFSNDILADACKTLEKYFPDST
CCCCCCCCEEEEECCHHHHHHHCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHCCCCC
VSCGDIAALHEFPEADVVVGGYPCQSFSMAGNRDPKKDASDTPRVP
CCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKIGEPKIKIAGPSVISLFSGCGGMDFGIKAAGGRIVFSNDILADACKTLEKYFPDST
CCCCCCCCEEEEECCHHHHHHHCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHCCCCC
VSCGDIAALHEFPEADVVVGGYPCQSFSMAGNRDPKKDASDTPRVP
CCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7607524 [H]