| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241308
Identifier: 21241308
GI number: 21241308
Start: 627467
End: 628081
Strand: Direct
Name: 21241308
Synonym: XAC0537
Alternate gene names: NA
Gene position: 627467-628081 (Clockwise)
Preceding gene: 21241307
Following gene: 21241309
Centisome position: 12.12
GC content: 64.39
Gene sequence:
>615_bases ATGAACGTTCGGCGCTTTCTTCTTCCCATCGCCATGCTGGTGGGGTTGCTGGTTGGTCAGGCGGCATTCGCGCAGGACGG CTGGTCGCTGGCCAAGGATGCCGAAGGCATCAAGGTCTACGTGCGCAACGTCGAGGGCTCGCCCTTACGCGAATTTCGGG GCGAGGTGCGATTGAAGGCCGCTGCGGACGATGTGGTCAAGGTGCTGCGCGACGCGAATGCCTTCCGCCAGTGGATGCCG GACGTGGCCGCTTCGGAACTGCTGAAGGCCACCGACACCGAGCAGTACCACTATCTGGACAACAGCGCGCCCTGGCCGGT ATCCAACCGCGACGGCGTCTACCACTTCACCTATGAAAAGGCCGGCGACGGTGCCATCACCGTGCGTGTGGAGGCAGTCC CGGACTACTTGCCACTGCGCAAGGGCAAGGTGCGCATTCCCCGGGCCAAGGGTCAATGGACGCTGGTGCCGGATGCGGAT GGCGTGGACGTCACCTACCAGATGCACGCCTCGCCTGGTGGGTCCATTCCGAGCTGGCTGGCCAACCAGACGGTGGTGGA GACGCCCTTCGGGACGCTCAAGGCGCTGCGAAGCCACTTGCGGCAAGCCCACTGA
Upstream 100 bases:
>100_bases TGAGGTTGGCGCACATTGCCGTTCCTCTGGCGCGAATGGCGAGTTCATCGCAAGGCGGGGCGCTCTATCGTCAGTTCATT CCTCCACTTGAGGTGTCACC
Downstream 100 bases:
>100_bases CCAGGCCCATGAACGTCGCGTCGGCCAGCTGTTCGGCAGCGAAAGATTTCACGGATACATCGAAGGCAAAGAGCGCTGGT CGTCGGCTTTTCGATGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNVRRFLLPIAMLVGLLVGQAAFAQDGWSLAKDAEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMP DVAASELLKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEKAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDAD GVDVTYQMHASPGGSIPSWLANQTVVETPFGTLKALRSHLRQAH
Sequences:
>Translated_204_residues MNVRRFLLPIAMLVGLLVGQAAFAQDGWSLAKDAEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMP DVAASELLKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEKAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDAD GVDVTYQMHASPGGSIPSWLANQTVVETPFGTLKALRSHLRQAH >Mature_204_residues MNVRRFLLPIAMLVGLLVGQAAFAQDGWSLAKDAEGIKVYVRNVEGSPLREFRGEVRLKAAADDVVKVLRDANAFRQWMP DVAASELLKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEKAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDAD GVDVTYQMHASPGGSIPSWLANQTVVETPFGTLKALRSHLRQAH
Specific function: May play a role in the interaction of the bacterium with animal cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 START domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002913 [H]
Pfam domain/function: PF01852 START [H]
EC number: NA
Molecular weight: Translated: 22610; Mature: 22610
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS50848 START
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRRFLLPIAMLVGLLVGQAAFAQDGWSLAKDAEGIKVYVRNVEGSPLREFRGEVRLKA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHCCEEEEH AADDVVKVLRDANAFRQWMPDVAASELLKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEC AGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDADGVDVTYQMHASPGGSIPSWL CCCCEEEEEEEECCCCCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHH ANQTVVETPFGTLKALRSHLRQAH CCCEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MNVRRFLLPIAMLVGLLVGQAAFAQDGWSLAKDAEGIKVYVRNVEGSPLREFRGEVRLKA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHCCEEEEH AADDVVKVLRDANAFRQWMPDVAASELLKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEC AGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVPDADGVDVTYQMHASPGGSIPSWL CCCCEEEEEEEECCCCCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHH ANQTVVETPFGTLKALRSHLRQAH CCCEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 11276083 [H]