| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is cutA [H]
Identifier: 21241306
GI number: 21241306
Start: 625422
End: 625757
Strand: Reverse
Name: cutA [H]
Synonym: XAC0535
Alternate gene names: 21241306
Gene position: 625757-625422 (Counterclockwise)
Preceding gene: 77748533
Following gene: 21241305
Centisome position: 12.09
GC content: 67.56
Gene sequence:
>336_bases ATGTCTTCTCCCCCACCCCTCCGCCTGCTGTTCAGTACCTGCCCCGATCCGGCCAGCGCCGCGCGGATCGCCCAGGTCCT GGTCGAAGAGCGCCTGGCCGCGTGCGTGAGCCGCCTGCCCGGCGTGCATGCTACGTATCGCTGGCAGGACGTGGTGGAAC AGGCCGAGGAAGTGCTGCTGCTGATCAAGACCGCCGCCGATCGCATCCCCGCGTTGCAACAGCGGCTGTGCGAGCTGCAC CCCTTCGACCTCCCCGAACTGATCGAGCTCGAGGTCGCCGGCGGCTTGCCTGCCTACCTGCAGTGGGTGTACGCCGAAAC CCGTGAGGAACCGTAA
Upstream 100 bases:
>100_bases CGGTCGTCGCATGGGCCTGCAACCAAGTCCCCGCGGCCCCGGACCTACGTCCGAAACAGGCCCGGCAAAGCCCTGCCGGC GTCCCTATACTGTCGGTCGC
Downstream 100 bases:
>100_bases GCCGATGACCGTGCTGCACCGTATCGCCGCCCTGTGCCTGCTGGCCCTGGCCGCTTTCCCCGCCCTGGCGATCAGCGAAA AGGATCTGCTGCCAGTGGAC
Product: periplasmic divalent cation tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSSPPPLRLLFSTCPDPASAARIAQVLVEERLAACVSRLPGVHATYRWQDVVEQAEEVLLLIKTAADRIPALQQRLCELH PFDLPELIELEVAGGLPAYLQWVYAETREEP
Sequences:
>Translated_111_residues MSSPPPLRLLFSTCPDPASAARIAQVLVEERLAACVSRLPGVHATYRWQDVVEQAEEVLLLIKTAADRIPALQQRLCELH PFDLPELIELEVAGGLPAYLQWVYAETREEP >Mature_110_residues SSPPPLRLLFSTCPDPASAARIAQVLVEERLAACVSRLPGVHATYRWQDVVEQAEEVLLLIKTAADRIPALQQRLCELHP FDLPELIELEVAGGLPAYLQWVYAETREEP
Specific function: Involved in resistance toward heavy metals [H]
COG id: COG1324
COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutA family [H]
Homologues:
Organism=Homo sapiens, GI62526024, Length=100, Percent_Identity=41, Blast_Score=86, Evalue=6e-18, Organism=Homo sapiens, GI62526022, Length=100, Percent_Identity=41, Blast_Score=86, Evalue=6e-18, Organism=Homo sapiens, GI7706244, Length=100, Percent_Identity=41, Blast_Score=86, Evalue=6e-18, Organism=Homo sapiens, GI62198241, Length=100, Percent_Identity=41, Blast_Score=86, Evalue=7e-18, Organism=Homo sapiens, GI62526026, Length=100, Percent_Identity=41, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790579, Length=107, Percent_Identity=36.4485981308411, Blast_Score=71, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32565476, Length=109, Percent_Identity=28.4403669724771, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641937, Length=93, Percent_Identity=38.7096774193548, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004323 - InterPro: IPR011322 [H]
Pfam domain/function: PF03091 CutA1 [H]
EC number: NA
Molecular weight: Translated: 12388; Mature: 12257
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPPPLRLLFSTCPDPASAARIAQVLVEERLAACVSRLPGVHATYRWQDVVEQAEEVLL CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LIKTAADRIPALQQRLCELHPFDLPELIELEVAGGLPAYLQWVYAETREEP HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SSPPPLRLLFSTCPDPASAARIAQVLVEERLAACVSRLPGVHATYRWQDVVEQAEEVLL CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LIKTAADRIPALQQRLCELHPFDLPELIELEVAGGLPAYLQWVYAETREEP HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA