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The map label for this gene is ynbC [H]

Identifier: 21241286

GI number: 21241286

Start: 605480

End: 607240

Strand: Direct

Name: ynbC [H]

Synonym: XAC0515

Alternate gene names: 21241286

Gene position: 605480-607240 (Clockwise)

Preceding gene: 21241285

Following gene: 21241287

Centisome position: 11.7

GC content: 67.06

Gene sequence:

>1761_bases
ATGCGCACAGTGCTAGAGCGCGAGTTCGTCAGTTTCGATGGTGTGCCGCTGTTCTACCGGCACTGGCCGTTGCACGATGC
CGTCGCGACCGGCACGCCCAGGGCGGTGGTGCTGCTGCATCGTGGCCATGAGCACTCCGGCCGTGTGATGCATCTTGCCG
AAGAACTCGACATGCCCGATGCGCAGTTCTTTGCCTGGGATGCACGCGGCAACGGTCGCTCGCCCGGCGTGCGTGGCGAT
GCGCCGGGCTTCGAGGCGCTGGTGCGCGATCTGGACAGCTTCATCGCGCATCTTCGCGCCACCCACGGCATCGCCGTGCA
GGACATCGTGGTGATTGCGCAGAGTGTGGGCGCGGTGGTGGCTGCCACCTGGGTACACGATTACGCCCCGCCGCTGCGCG
CGCTGGTGCTGGCATCGCCGGCGTTCAAGGTGAAGTTGTATGTGCCGTTCGCACGCGCCGGGTTGGCGTTGCTGCATGCG
CTGCGCGGTAACTTCTTCGTCAACAGCTACGTCAAGCCGCAATGGCTGACGCATGATCCGGCGCGCGTGGAAAGCTATCG
CACCGATCCGTTGATCACCCGCCCGATTTCGGTGCGCGTATTGCTCGGTCTGTACGCGGCCGCCGATCGCGTGGTGGACG
ATGCACAGGCGATCACCGTGCCGACCCAGTTGCTGGTCTCCGGCGCGGATGTTGTGGTGCATCGCGGCCCGCAGGATCGC
TTCTACGAAAACCTGCGCTCGCCGATCAAGCAGCGCCACTGGCTGCCGGGGTTTTTCCACGACACCCTGGGCGAACGCGA
TCGCGCGATTGCCATCGCGCACATTCGCCAGTTCGTCCAAGTGCGGTTTGCGCAACCGCCGGTGCGCGCCGCGCTGCGCA
ATGCCCACCGTGCCGGCCCCAGTTTCGAAGAGGCCGAACGGCTGGCCTGGCCACCGCAGCGCAACAGCCTGCAGGACCTG
CGCTGGCGCGGCGTGCGTGCCGGCCTGCGCCTGGGTGGCAAGCTCTCCGAGGGCATCGCGCTTGGTCTGCAGACCGGTTT
CGATTCCGGCAGCACATTGGACTACATCTACCGCAATCAGGCGCATGGTCGCGGGCCGCTGGGCCGCATGATCGACCGCA
CGTATCTCAACGCGATCGGTTGGCGCGGCATCCGCATCCGCGGCAGCCATCTGGGCGAATTGCTGCGCGAGGCAGCGGCG
CGCTTGCGTGGCGCCGGCAAGCCGGTACGCGTCCTGGACATCGCTGCCGGACACGGCCGCTATGTGCTCCAGGCGCTGGG
CAGCGGCGCACAGCGTGCCGATGCAATCGTGCTGCGCGACTTCAGCCCGCCCAACGTGACCCAGGGCACTGCGCTGATCC
AGGCGCTGGGCGCTGGCGACATCGCCCGTTTCGAACAAGGCGATGCGTTCGACCCGGCAGCATTGGCGTCCGTGCAACCG
GCTCCGACGCTGGCGGTGGTCTCGGGCCTGTACGAATTGTTTGCCGATAACGACCAGGTCGCGCGCTCGCTGGCCGGCCT
GGCCGCGGCGGTGCAGCCGGGCGGTTATCTGCTTTACACCGGTCAGCCCTGGCATCCGCAGCTGGAATTCATTGCGCGCG
CGCTGACCAGTCACCGCGATGGCGTGGCCTGGGTGATGCGCCGGCGGAGCCAGCAGGAGATGGATGGCCTGGTGGAAGCG
GCGGGCTTTCGCAAGGTGGCGCAACGCATCGATGCGTTCGGCATCTTCACCGTGTCGATGGCGCAGCGGGTCGACGCATG
A

Upstream 100 bases:

>100_bases
CCCGCAGGCACCTAGCGATACATCGCCGCAGCAACGCCGCTGGCCGCGCTGCTGTGCGGTGATCTCTGCGATTCAACCTT
TCGACTTTCAGGATGCTTCG

Downstream 100 bases:

>100_bases
GCCGCGCTGCGCGGCCAGTCGGTCGTGCCGCGCTGTGGCTGGCGTTGCTGGGGCCGTTTTTCTTCCTCAGTTACGGCCTG
GCCAACACGCTGGCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MRTVLEREFVSFDGVPLFYRHWPLHDAVATGTPRAVVLLHRGHEHSGRVMHLAEELDMPDAQFFAWDARGNGRSPGVRGD
APGFEALVRDLDSFIAHLRATHGIAVQDIVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALLHA
LRGNFFVNSYVKPQWLTHDPARVESYRTDPLITRPISVRVLLGLYAAADRVVDDAQAITVPTQLLVSGADVVVHRGPQDR
FYENLRSPIKQRHWLPGFFHDTLGERDRAIAIAHIRQFVQVRFAQPPVRAALRNAHRAGPSFEEAERLAWPPQRNSLQDL
RWRGVRAGLRLGGKLSEGIALGLQTGFDSGSTLDYIYRNQAHGRGPLGRMIDRTYLNAIGWRGIRIRGSHLGELLREAAA
RLRGAGKPVRVLDIAAGHGRYVLQALGSGAQRADAIVLRDFSPPNVTQGTALIQALGAGDIARFEQGDAFDPAALASVQP
APTLAVVSGLYELFADNDQVARSLAGLAAAVQPGGYLLYTGQPWHPQLEFIARALTSHRDGVAWVMRRRSQQEMDGLVEA
AGFRKVAQRIDAFGIFTVSMAQRVDA

Sequences:

>Translated_586_residues
MRTVLEREFVSFDGVPLFYRHWPLHDAVATGTPRAVVLLHRGHEHSGRVMHLAEELDMPDAQFFAWDARGNGRSPGVRGD
APGFEALVRDLDSFIAHLRATHGIAVQDIVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALLHA
LRGNFFVNSYVKPQWLTHDPARVESYRTDPLITRPISVRVLLGLYAAADRVVDDAQAITVPTQLLVSGADVVVHRGPQDR
FYENLRSPIKQRHWLPGFFHDTLGERDRAIAIAHIRQFVQVRFAQPPVRAALRNAHRAGPSFEEAERLAWPPQRNSLQDL
RWRGVRAGLRLGGKLSEGIALGLQTGFDSGSTLDYIYRNQAHGRGPLGRMIDRTYLNAIGWRGIRIRGSHLGELLREAAA
RLRGAGKPVRVLDIAAGHGRYVLQALGSGAQRADAIVLRDFSPPNVTQGTALIQALGAGDIARFEQGDAFDPAALASVQP
APTLAVVSGLYELFADNDQVARSLAGLAAAVQPGGYLLYTGQPWHPQLEFIARALTSHRDGVAWVMRRRSQQEMDGLVEA
AGFRKVAQRIDAFGIFTVSMAQRVDA
>Mature_586_residues
MRTVLEREFVSFDGVPLFYRHWPLHDAVATGTPRAVVLLHRGHEHSGRVMHLAEELDMPDAQFFAWDARGNGRSPGVRGD
APGFEALVRDLDSFIAHLRATHGIAVQDIVVIAQSVGAVVAATWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALLHA
LRGNFFVNSYVKPQWLTHDPARVESYRTDPLITRPISVRVLLGLYAAADRVVDDAQAITVPTQLLVSGADVVVHRGPQDR
FYENLRSPIKQRHWLPGFFHDTLGERDRAIAIAHIRQFVQVRFAQPPVRAALRNAHRAGPSFEEAERLAWPPQRNSLQDL
RWRGVRAGLRLGGKLSEGIALGLQTGFDSGSTLDYIYRNQAHGRGPLGRMIDRTYLNAIGWRGIRIRGSHLGELLREAAA
RLRGAGKPVRVLDIAAGHGRYVLQALGSGAQRADAIVLRDFSPPNVTQGTALIQALGAGDIARFEQGDAFDPAALASVQP
APTLAVVSGLYELFADNDQVARSLAGLAAAVQPGGYLLYTGQPWHPQLEFIARALTSHRDGVAWVMRRRSQQEMDGLVEA
AGFRKVAQRIDAFGIFTVSMAQRVDA

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=230, Percent_Identity=30, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI6005786, Length=230, Percent_Identity=30, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1787678, Length=580, Percent_Identity=55.6896551724138, Blast_Score=644, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 64314; Mature: 64314

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVLEREFVSFDGVPLFYRHWPLHDAVATGTPRAVVLLHRGHEHSGRVMHLAEELDMPD
CCCHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEHHHCCCCC
AQFFAWDARGNGRSPGVRGDAPGFEALVRDLDSFIAHLRATHGIAVQDIVVIAQSVGAVV
CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AATWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALLHALRGNFFVNSYVKPQWLTHDP
HHHHHHHCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
ARVESYRTDPLITRPISVRVLLGLYAAADRVVDDAQAITVPTQLLVSGADVVVHRGPQDR
HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCEEEECCCHHH
FYENLRSPIKQRHWLPGFFHDTLGERDRAIAIAHIRQFVQVRFAQPPVRAALRNAHRAGP
HHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SFEEAERLAWPPQRNSLQDLRWRGVRAGLRLGGKLSEGIALGLQTGFDSGSTLDYIYRNQ
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEHHHHCCC
AHGRGPLGRMIDRTYLNAIGWRGIRIRGSHLGELLREAAARLRGAGKPVRVLDIAAGHGR
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH
YVLQALGSGAQRADAIVLRDFSPPNVTQGTALIQALGAGDIARFEQGDAFDPAALASVQP
HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCHHHCCCCC
APTLAVVSGLYELFADNDQVARSLAGLAAAVQPGGYLLYTGQPWHPQLEFIARALTSHRD
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
GVAWVMRRRSQQEMDGLVEAAGFRKVAQRIDAFGIFTVSMAQRVDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTVLEREFVSFDGVPLFYRHWPLHDAVATGTPRAVVLLHRGHEHSGRVMHLAEELDMPD
CCCHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEHHHCCCCC
AQFFAWDARGNGRSPGVRGDAPGFEALVRDLDSFIAHLRATHGIAVQDIVVIAQSVGAVV
CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AATWVHDYAPPLRALVLASPAFKVKLYVPFARAGLALLHALRGNFFVNSYVKPQWLTHDP
HHHHHHHCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
ARVESYRTDPLITRPISVRVLLGLYAAADRVVDDAQAITVPTQLLVSGADVVVHRGPQDR
HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCEEEECCCHHH
FYENLRSPIKQRHWLPGFFHDTLGERDRAIAIAHIRQFVQVRFAQPPVRAALRNAHRAGP
HHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
SFEEAERLAWPPQRNSLQDLRWRGVRAGLRLGGKLSEGIALGLQTGFDSGSTLDYIYRNQ
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEHHHHCCC
AHGRGPLGRMIDRTYLNAIGWRGIRIRGSHLGELLREAAARLRGAGKPVRVLDIAAGHGR
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH
YVLQALGSGAQRADAIVLRDFSPPNVTQGTALIQALGAGDIARFEQGDAFDPAALASVQP
HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCHHHCCCCC
APTLAVVSGLYELFADNDQVARSLAGLAAAVQPGGYLLYTGQPWHPQLEFIARALTSHRD
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
GVAWVMRRRSQQEMDGLVEAAGFRKVAQRIDAFGIFTVSMAQRVDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]