| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241106
Identifier: 21241106
GI number: 21241106
Start: 397869
End: 398525
Strand: Reverse
Name: 21241106
Synonym: XAC0332
Alternate gene names: NA
Gene position: 398525-397869 (Counterclockwise)
Preceding gene: 21241107
Following gene: 21241105
Centisome position: 7.7
GC content: 58.45
Gene sequence:
>657_bases ATGGACGCCACTGCCCAACGCATGCCACTTCCACTGCCTGACGGCCACGCCAAGGTCTTGCTGCATTCGTGCTGCGCGCC GTGCTCTGGCGAGGTCATGGAGGCGATGCTGGCCTCCGGCATCGACTACACCATCTTTTTCTACAATCCCAACATTCATC CGCGCAAGGAATACGAGTTGCGCAAGGACGAAAACGTGCGTTTTGCCGAACAGTTCGGCGTGCCCTTCATCGACGCCGAC TACGATCGGGACAACTGGTTCGAGCGGGCACGCGGGATGGAAAACGAACCTGAGCGCGGCGTGCGTTGCACCATGTGCTT CGACATGCGCTTCGAACGCACCGCGCTGTATGCCCACGAGCACGGTTTTCCGGTGATCACCAGTTCGCTGGGTATCTCGC GCTGGAAGAACATGCAGCAAATCAACGACTGCGGCATGCGCGCTGCGGCCAAGTATCCCGGCTTGATGTATTGGGAGTAC AACTGGCGCAAGGGTGGTGGCGCCTCGCGCATGATTCAGATCAGCAAGCGCGAGAACTTCTATCAACAGGAATACTGCGG TTGCGTCTATTCCCTGCGCGATACCAATCGGCATCGTGTGGACAGCGGTCGCAAGCGCATTCAACTCGGCGTGAAGTTCT ATGGCGATGACGAGTAG
Upstream 100 bases:
>100_bases GCGCGCGCGAGGCGGACATCGCAATCGATTACCTGCGCGCCTTCATCGAACTGGCGCGTGCGCCGGCCAATGCCACTGCC TATCCGCAAGGACCCCACTG
Downstream 100 bases:
>100_bases CAAGACTGAGCCTTCGCCAGTTCAGCGGCGACCACACGTGAATTTGGGGCTCCTCCCGCTCGATCAGCGCGTGGTGGCGA TGTCACCCGATCATCATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MDATAQRMPLPLPDGHAKVLLHSCCAPCSGEVMEAMLASGIDYTIFFYNPNIHPRKEYELRKDENVRFAEQFGVPFIDAD YDRDNWFERARGMENEPERGVRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMQQINDCGMRAAAKYPGLMYWEY NWRKGGGASRMIQISKRENFYQQEYCGCVYSLRDTNRHRVDSGRKRIQLGVKFYGDDE
Sequences:
>Translated_218_residues MDATAQRMPLPLPDGHAKVLLHSCCAPCSGEVMEAMLASGIDYTIFFYNPNIHPRKEYELRKDENVRFAEQFGVPFIDAD YDRDNWFERARGMENEPERGVRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMQQINDCGMRAAAKYPGLMYWEY NWRKGGGASRMIQISKRENFYQQEYCGCVYSLRDTNRHRVDSGRKRIQLGVKFYGDDE >Mature_218_residues MDATAQRMPLPLPDGHAKVLLHSCCAPCSGEVMEAMLASGIDYTIFFYNPNIHPRKEYELRKDENVRFAEQFGVPFIDAD YDRDNWFERARGMENEPERGVRCTMCFDMRFERTALYAHEHGFPVITSSLGISRWKNMQQINDCGMRAAAKYPGLMYWEY NWRKGGGASRMIQISKRENFYQQEYCGCVYSLRDTNRHRVDSGRKRIQLGVKFYGDDE
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 25461; Mature: 25461
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATAQRMPLPLPDGHAKVLLHSCCAPCSGEVMEAMLASGIDYTIFFYNPNIHPRKEYEL CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC RKDENVRFAEQFGVPFIDADYDRDNWFERARGMENEPERGVRCTMCFDMRFERTALYAHE CCCCCCCHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHEEEEEC HGFPVITSSLGISRWKNMQQINDCGMRAAAKYPGLMYWEYNWRKGGGASRMIQISKRENF CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHCCH YQQEYCGCVYSLRDTNRHRVDSGRKRIQLGVKFYGDDE HHHHHHHHHEECCCCCCHHHHCCCEEEEEEEEEECCCC >Mature Secondary Structure MDATAQRMPLPLPDGHAKVLLHSCCAPCSGEVMEAMLASGIDYTIFFYNPNIHPRKEYEL CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC RKDENVRFAEQFGVPFIDADYDRDNWFERARGMENEPERGVRCTMCFDMRFERTALYAHE CCCCCCCHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHEEEEEC HGFPVITSSLGISRWKNMQQINDCGMRAAAKYPGLMYWEYNWRKGGGASRMIQISKRENF CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEHHHCCH YQQEYCGCVYSLRDTNRHRVDSGRKRIQLGVKFYGDDE HHHHHHHHHEECCCCCCHHHHCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]