| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ydjP [H]
Identifier: 21241093
GI number: 21241093
Start: 380408
End: 381247
Strand: Direct
Name: ydjP [H]
Synonym: XAC0319
Alternate gene names: 21241093
Gene position: 380408-381247 (Clockwise)
Preceding gene: 21241091
Following gene: 77748522
Centisome position: 7.35
GC content: 67.86
Gene sequence:
>840_bases GTGGCGACCGCCAGCCCGGGCGCCATTGCTGCCACACGCAGCTATACCGTCACCGCACCCGATGGCGTGCGCCTGGCGGT GCAGGAGCACGGCGCCACCGACGGGCCGGCCATCGTCTTCGTGCATGGCCTGCTCGGTAGTCGCATCAATTGGGATGCAC AACTGGCCGATGCGCGTCTGCAGCGGTATCGGCTGATTACTTACGATTTGCGCGGGCATGGCGTCTCCGGCAAACCGGTC GCCGCATCGGCGTATCAAGAGGGCACGCGGTGGGCCGACGACCTGGCTGCCGTGTTGAAGGCCGCAAACGCGCGCGAGAC GGTCCTGGTGGGCTGGTCCCTGGGCGGCGCGGTGATCAGCAACTACCTGAGCCGATATGGCGATACCGGGCTTGCCGGCG TGGTGTACGTCGACGGTGTGATCGAACTGCGCGCGGAGCAGTTGGGCGCGCATCCGGCGATCTATCGCGATCTGGTTTCG CCCGATCTGCGTACGCATCTGCAGGCGGTGCAGGATTTCCTGCGGCTGTGCTTCGCCACCCAGCCGCCCATCCCGGTGTT CGAGGCCCTGCTGGCCAGCGCATCGCTGGCCTCATGGGACATGCAGCGTGCCGTGCAAGGCATGTCGGTCGATGTCGCCG GCCTGCAGCGCACGCGCCTGCCGGTGCTGCTGATGTACGGCGCGCGCGATGCACTGGTCGCCACCGAGCCGACGGTGGCG CGTGCGCGCCAGCTGCAGCCGCGCGCGCAGACCGTGCTGTATCCGGACGCCGGGCACGCGCCGTTCCTGGAGGACAGCGC GCGTTTCAATCAGGATCTGCTGCGCTTTGTCGAACACTGA
Upstream 100 bases:
>100_bases TCGTCTGGAGCTCACCCCGATGTCTGTTCGCCTCTTCCCCGGCAGCCGCATGCTGCCGCTACGCTGCCTGTTGGCCTGCC TGTTGTTGGTGTGCTCGATA
Downstream 100 bases:
>100_bases ACGCGCCGCGCCTTGAGCGCCGGCAGCCACACGTGGCCAACGGCGCGAATGGATCGGAACCAACTGCGTGGCCATGGCGT GATGCTGTACCGTCCCCGTG
Product: chloroperoxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MATASPGAIAATRSYTVTAPDGVRLAVQEHGATDGPAIVFVHGLLGSRINWDAQLADARLQRYRLITYDLRGHGVSGKPV AASAYQEGTRWADDLAAVLKAANARETVLVGWSLGGAVISNYLSRYGDTGLAGVVYVDGVIELRAEQLGAHPAIYRDLVS PDLRTHLQAVQDFLRLCFATQPPIPVFEALLASASLASWDMQRAVQGMSVDVAGLQRTRLPVLLMYGARDALVATEPTVA RARQLQPRAQTVLYPDAGHAPFLEDSARFNQDLLRFVEH
Sequences:
>Translated_279_residues MATASPGAIAATRSYTVTAPDGVRLAVQEHGATDGPAIVFVHGLLGSRINWDAQLADARLQRYRLITYDLRGHGVSGKPV AASAYQEGTRWADDLAAVLKAANARETVLVGWSLGGAVISNYLSRYGDTGLAGVVYVDGVIELRAEQLGAHPAIYRDLVS PDLRTHLQAVQDFLRLCFATQPPIPVFEALLASASLASWDMQRAVQGMSVDVAGLQRTRLPVLLMYGARDALVATEPTVA RARQLQPRAQTVLYPDAGHAPFLEDSARFNQDLLRFVEH >Mature_278_residues ATASPGAIAATRSYTVTAPDGVRLAVQEHGATDGPAIVFVHGLLGSRINWDAQLADARLQRYRLITYDLRGHGVSGKPVA ASAYQEGTRWADDLAAVLKAANARETVLVGWSLGGAVISNYLSRYGDTGLAGVVYVDGVIELRAEQLGAHPAIYRDLVSP DLRTHLQAVQDFLRLCFATQPPIPVFEALLASASLASWDMQRAVQGMSVDVAGLQRTRLPVLLMYGARDALVATEPTVAR ARQLQPRAQTVLYPDAGHAPFLEDSARFNQDLLRFVEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 30098; Mature: 29966
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATASPGAIAATRSYTVTAPDGVRLAVQEHGATDGPAIVFVHGLLGSRINWDAQLADARL CCCCCCCCEEEECEEEEECCCCEEEEEECCCCCCCCEEEEEECHHCCCCCCCHHHHHHHH QRYRLITYDLRGHGVSGKPVAASAYQEGTRWADDLAAVLKAANARETVLVGWSLGGAVIS HHEEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH NYLSRYGDTGLAGVVYVDGVIELRAEQLGAHPAIYRDLVSPDLRTHLQAVQDFLRLCFAT HHHHHCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC QPPIPVFEALLASASLASWDMQRAVQGMSVDVAGLQRTRLPVLLMYGARDALVATEPTVA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCEEEEECCCCCEEECCCHHH RARQLQPRAQTVLYPDAGHAPFLEDSARFNQDLLRFVEH HHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ATASPGAIAATRSYTVTAPDGVRLAVQEHGATDGPAIVFVHGLLGSRINWDAQLADARL CCCCCCCEEEECEEEEECCCCEEEEEECCCCCCCCEEEEEECHHCCCCCCCHHHHHHHH QRYRLITYDLRGHGVSGKPVAASAYQEGTRWADDLAAVLKAANARETVLVGWSLGGAVIS HHEEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH NYLSRYGDTGLAGVVYVDGVIELRAEQLGAHPAIYRDLVSPDLRTHLQAVQDFLRLCFAT HHHHHCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC QPPIPVFEALLASASLASWDMQRAVQGMSVDVAGLQRTRLPVLLMYGARDALVATEPTVA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCEEEEECCCCCEEECCCHHH RARQLQPRAQTVLYPDAGHAPFLEDSARFNQDLLRFVEH HHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]