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The map label for this gene is ynfM [H]

Identifier: 21241091

GI number: 21241091

Start: 378428

End: 379789

Strand: Direct

Name: ynfM [H]

Synonym: XAC0317

Alternate gene names: 21241091

Gene position: 378428-379789 (Clockwise)

Preceding gene: 21241089

Following gene: 21241093

Centisome position: 7.31

GC content: 66.3

Gene sequence:

>1362_bases
ATGGCAGCTGCCACCATCATATATTGGACAGGGGGTGACGGCAGGCGAATACTCGCCTTCCCACGTCGCACGTGCACTGC
TGTGTCTTCTTCCGATCATCGCTCGGGTTCGCTGCCCGACCCATCCACGCGTTCCGACACCGGCGTCGATGCCCCCGCAG
GGGTGCGCATTCGCGTGGCGTTGTTTCTGGCCGGCTTTGCCACCTTCTCGCTGCTGTACAGCGTGCAGCCGGTGCTGCCG
GAATTCGCGCGCGCCTTCAAGGTGGACGCAGCGACCGCCTCGCTGCCGTTGTCGCTGGCGACCGGTGCGCTGGCGCTGGC
GATCTTCTGCGCTGGTGCAGTGTCGGAAAACCTGGGCCGGCGCGGATTGATGTTCGTGTCGATCGCCATCGCGGCAGTGC
TCAACCTGATTGCTGCGTTCCTGCCGCACTGGGGCGCGCTGGTGGTGGTGCGTACCTTGTCCGGCATCGCGCTGGGCGGG
GTGCCGGCGGTGGCGATGGTGTATCTGGGCGAAGAATTGCCGGCCAGCAAGATGGGGGCGGCCACCGGCCTGTACGTGGC
CGGCAATGCCTTCGGCGGCATGAGCGGGCGCATCGTGATGAGCGTGCTGACCGACCACACCGATTGGCGCACCGCATTGG
CGGTGTTGAGCGCGTTCGATCTGCTGTGCGCGCTGGCGTTCTTCTGGTTGCTGCCGCCGTCGCGTAACTTCGTGCGCCGG
CACGGCATCAACCTGCGCTTTCATCTGCGCGCCTGGGCCGGGCATCTGCGCGATCGCAATCTGCCGTTCTTGTTCGCGCT
GCCGTTCCTGTTGATGGGTGTGTTTGTGTGCCTGTACAACTACGCCGGCTTTCGCCTGGGTGGGCCGGAATTCGGCTTGA
GCCAGAGCCAGATCGGCATGATCTTCAGCGCCTATGTGTTCGGCATCGTCAGTTCCTCGGTGGCCGGTGCGGCATCGGAC
CGGTTCGGGCGCGGGCCGGTGGTCACGACCGGCATCGTGTTGTGCGTGCTCGGCGTGGCGCTGACCCTGGCGCACGCGCT
GGCGTTGGTAGTGGCCGGTATCGTGGTGGTGACGATCGGGTTTTTCATCGCGCATTCGGCCGCCAGCGCATGGGTGAGCC
GGCTCGGTGGCGCGCATCGCAGCCATGCCGCGTCGCTGTATCTGCTGGCGTATTACGCCGGATCCAGCGTGATCGGCGCG
CTGGGTGGCTGGTTCTGGCAGCACGGCGGCTGGGGCGCGTTGGTCGGTATGTGCCTGACGCTGTTGGCGATCGCCTTTGC
GGCGGCATACGTGCTGCGCCAACGTGCCGACGATGCACGCCCCTATGGCCGCTTTGCCCCGCATCCTGCGCGAGGCGAGT
GA

Upstream 100 bases:

>100_bases
GGCCAATGCCCACGCGCGCGGCGGCGCGGGTGAAGTTGCCTTCTTCGGCAACCGCCAGGAAATAACGCAGGTGGCGCAAC
TCCATCCATCTGTTCCAGAT

Downstream 100 bases:

>100_bases
TGCACAGCGACCGGGGCTTCTAGCGCGCCCGCTTGCGCCGTGTGGTTTGCGCGGCTGAAGACGTGGCAGCCCTCGCATCC
GGGGCTGCCTGCGCCAAGGT

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MAAATIIYWTGGDGRRILAFPRRTCTAVSSSDHRSGSLPDPSTRSDTGVDAPAGVRIRVALFLAGFATFSLLYSVQPVLP
EFARAFKVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFVSIAIAAVLNLIAAFLPHWGALVVVRTLSGIALGG
VPAVAMVYLGEELPASKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSAFDLLCALAFFWLLPPSRNFVRR
HGINLRFHLRAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAASD
RFGRGPVVTTGIVLCVLGVALTLAHALALVVAGIVVVTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGSSVIGA
LGGWFWQHGGWGALVGMCLTLLAIAFAAAYVLRQRADDARPYGRFAPHPARGE

Sequences:

>Translated_453_residues
MAAATIIYWTGGDGRRILAFPRRTCTAVSSSDHRSGSLPDPSTRSDTGVDAPAGVRIRVALFLAGFATFSLLYSVQPVLP
EFARAFKVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFVSIAIAAVLNLIAAFLPHWGALVVVRTLSGIALGG
VPAVAMVYLGEELPASKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSAFDLLCALAFFWLLPPSRNFVRR
HGINLRFHLRAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAASD
RFGRGPVVTTGIVLCVLGVALTLAHALALVVAGIVVVTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGSSVIGA
LGGWFWQHGGWGALVGMCLTLLAIAFAAAYVLRQRADDARPYGRFAPHPARGE
>Mature_452_residues
AAATIIYWTGGDGRRILAFPRRTCTAVSSSDHRSGSLPDPSTRSDTGVDAPAGVRIRVALFLAGFATFSLLYSVQPVLPE
FARAFKVDAATASLPLSLATGALALAIFCAGAVSENLGRRGLMFVSIAIAAVLNLIAAFLPHWGALVVVRTLSGIALGGV
PAVAMVYLGEELPASKMGAATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSAFDLLCALAFFWLLPPSRNFVRRH
GINLRFHLRAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGMIFSAYVFGIVSSSVAGAASDR
FGRGPVVTTGIVLCVLGVALTLAHALALVVAGIVVVTIGFFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGSSVIGAL
GGWFWQHGGWGALVGMCLTLLAIAFAAAYVLRQRADDARPYGRFAPHPARGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=413, Percent_Identity=40.1937046004843, Blast_Score=288, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47647; Mature: 47516

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAATIIYWTGGDGRRILAFPRRTCTAVSSSDHRSGSLPDPSTRSDTGVDAPAGVRIRVA
CCCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLAGFATFSLLYSVQPVLPEFARAFKVDAATASLPLSLATGALALAIFCAGAVSENLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
RGLMFVSIAIAAVLNLIAAFLPHWGALVVVRTLSGIALGGVPAVAMVYLGEELPASKMGA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCHHHHCC
ATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSAFDLLCALAFFWLLPPSRNFVRR
CCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HGINLRFHLRAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGM
CCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IFSAYVFGIVSSSVAGAASDRFGRGPVVTTGIVLCVLGVALTLAHALALVVAGIVVVTIG
HHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGSSVIGALGGWFWQHGGWGALVGMCLT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
LLAIAFAAAYVLRQRADDARPYGRFAPHPARGE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAATIIYWTGGDGRRILAFPRRTCTAVSSSDHRSGSLPDPSTRSDTGVDAPAGVRIRVA
CCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLAGFATFSLLYSVQPVLPEFARAFKVDAATASLPLSLATGALALAIFCAGAVSENLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
RGLMFVSIAIAAVLNLIAAFLPHWGALVVVRTLSGIALGGVPAVAMVYLGEELPASKMGA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCHHHHCC
ATGLYVAGNAFGGMSGRIVMSVLTDHTDWRTALAVLSAFDLLCALAFFWLLPPSRNFVRR
CCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HGINLRFHLRAWAGHLRDRNLPFLFALPFLLMGVFVCLYNYAGFRLGGPEFGLSQSQIGM
CCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IFSAYVFGIVSSSVAGAASDRFGRGPVVTTGIVLCVLGVALTLAHALALVVAGIVVVTIG
HHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFIAHSAASAWVSRLGGAHRSHAASLYLLAYYAGSSVIGALGGWFWQHGGWGALVGMCLT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
LLAIAFAAAYVLRQRADDARPYGRFAPHPARGE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]