| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241001
Identifier: 21241001
GI number: 21241001
Start: 275930
End: 276682
Strand: Direct
Name: 21241001
Synonym: XAC0227
Alternate gene names: NA
Gene position: 275930-276682 (Clockwise)
Preceding gene: 21241000
Following gene: 21241002
Centisome position: 5.33
GC content: 73.17
Gene sequence:
>753_bases ATGTTGCGTCAGACTGTTCTTGCAATTGCCCTGGCCTGCACCATCGGCGCCGCCGCCGCACAAGTGGCCGCCCCGCCGCC GCCGCCGGCTCCCAATGGCCCGATCGGCGGTCCGCCGGCCCCGCCGACCCCGGTCGCCGCCACACCGGTGAGCGTGAGCG GTACCGTCGAGCGCTTCCTGCTCAATCCCAATGGTGACGTCGACGGACTGTGGCTGCGCGACGGCACCCAGGTCGGGTTT CCGCCGCATCTGTCCAGCGAGGTGAAGGCGGCCGTCCGTGCCGGCGACAGTGTCGTCGTGAAGGGCTTCCGCCTGGGCAA TCTGCCGGTGCTGCAGGTCAGTTCGATCCGCTCCGGCCGTAGCGGCCGCGAGGTGGTCGACCGCCCGCCGACCTTCGGCG CGGCCCCGCCACCGCCGCCGACCCCCGGCCAGCTGACCCCGTTGCAGTCCGATGGCACGATCCAGCGCCTGGTCTATGGG CCTGCCGGCGAGATCAATGGTGCGCTGGTCAGCGATGGCACGGTGGTGCGGATGCCGCCGCATCTGGCGCTGCAGTTTGC CGATCTGCTGCGCGTGGGCGCACCGCTGAGCGCCAGCGGCCTGGGTGTGGCCACCCCGGACGGCCGTGCGATCGAGGCGA CCCAGTTGGGGCGTGATCGCTCCTCGCTGCGCGCGCTGTTCACCGCGCCGCGTCCGGACGGCCCGCTGCCGCCGCCCCCG CCGGTCGCTCCAGTCCCGCCGGCCGGCCGTTGA
Upstream 100 bases:
>100_bases CGGCCAATGAAAGTCATTTCAAAACAATCACTTGCCAATTGGCACGATTGCTGCTTTGCCTCTGGTACGCGGCCCCTTCC CGCCGCGCAGGAGACATCCC
Downstream 100 bases:
>100_bases GTCGTACCACCCCTGTCTTGTTCGTTGGTTTCCTCCGCTGGTCACGCAGCCGCGTGGCCAGCGGCTTGACCGGCAATGCC GGTCCTTTTTCGGAGTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFLLNPNGDVDGLWLRDGTQVGF PPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGRSGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYG PAGEINGALVSDGTVVRMPPHLALQFADLLRVGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPP PVAPVPPAGR
Sequences:
>Translated_250_residues MLRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFLLNPNGDVDGLWLRDGTQVGF PPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGRSGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYG PAGEINGALVSDGTVVRMPPHLALQFADLLRVGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPP PVAPVPPAGR >Mature_250_residues MLRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFLLNPNGDVDGLWLRDGTQVGF PPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGRSGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYG PAGEINGALVSDGTVVRMPPHLALQFADLLRVGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPP PVAPVPPAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25294; Mature: 25294
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEE LNPNGDVDGLWLRDGTQVGFPPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGR ECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCC SGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYGPAGEINGALVSDGTVVRMPP CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCEEEEECH HLALQFADLLRVGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPP HHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEHHHHCCCHHHHHEEEECCCCCCCCCCCC PVAPVPPAGR CCCCCCCCCC >Mature Secondary Structure MLRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEE LNPNGDVDGLWLRDGTQVGFPPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGR ECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCC SGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYGPAGEINGALVSDGTVVRMPP CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCEEEEECH HLALQFADLLRVGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPP HHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEHHHHCCCHHHHHEEEECCCCCCCCCCCC PVAPVPPAGR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA