| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240947
Identifier: 21240947
GI number: 21240947
Start: 213205
End: 213849
Strand: Reverse
Name: 21240947
Synonym: XAC0173
Alternate gene names: NA
Gene position: 213849-213205 (Counterclockwise)
Preceding gene: 21240948
Following gene: 21240934
Centisome position: 4.13
GC content: 67.91
Gene sequence:
>645_bases ATGGACCTGACGCATCTGCGCATCCGGCGCTTGGAGCTGGACGACACCCGCCTGCTGTTCACCCTGGCCAACGGCATGCG CATCGACGAGCCCATCCAGGCGCACCGGCTCTTGCTCAAGGCATCGCCGCCGCAACGCGCGCAATGGCAGATCACCGAAG ACGGCTTCGGGGTGAACTGGCCCGCGGTGGCGCCCCCCACCCCGGAGGGCCTGCTCAACATGCCCGAGTTGCTGTGGCGC CGCCGCGCTGCCCGTGCGCAGGCCAAGCTCACCCAGTTGCGCGGGCGCATGGATGCGCTGTCGCCAGGCGAGCGCGAACT CATCGCGCTGGCGCGGCTGGATGCGGACATGAACGAGAGCGGCTACGCGCGCTATTTCGACCGTTGGGATGCGGCGACCC GCAGCGATGCATTGCGGGGGCTGGCCGCCATGGGCGCGGTGCAAGCGCGCCAAGCCATCGAGGGCCTGGGCGCGGTGTTC GAGCGCCTGGAAGAAGATCCGAATCTGCTCAGCATCGAAGACATTCTCGATGCCATGAACGACACCGACCGCCAGCGCGT GGATGGTTGGGAAGAAGTCTACTACCGCCGCTCGGCTGAACTGGCGCGCCTGGGGCTGACGCACTACGGGGTGGACAAGG CCTGA
Upstream 100 bases:
>100_bases GCAGTGCCGCCCGGTCACGATGCCGCGATGTGGCCTGCACCGACTCGACACCACCGCCAACGCGCACTAAGGTCAAACCT CCCCACATCGCCTTCGCTCA
Downstream 100 bases:
>100_bases ACTGCCGGCGACGCAGCGGGGTTGGCCGCTACCTCATCGGCGCGGTGCTGATGTCGACGCCAAACGCGCGATCTACCGCC GGCACTGTGCATCATCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MDLTHLRIRRLELDDTRLLFTLANGMRIDEPIQAHRLLLKASPPQRAQWQITEDGFGVNWPAVAPPTPEGLLNMPELLWR RRAARAQAKLTQLRGRMDALSPGERELIALARLDADMNESGYARYFDRWDAATRSDALRGLAAMGAVQARQAIEGLGAVF ERLEEDPNLLSIEDILDAMNDTDRQRVDGWEEVYYRRSAELARLGLTHYGVDKA
Sequences:
>Translated_214_residues MDLTHLRIRRLELDDTRLLFTLANGMRIDEPIQAHRLLLKASPPQRAQWQITEDGFGVNWPAVAPPTPEGLLNMPELLWR RRAARAQAKLTQLRGRMDALSPGERELIALARLDADMNESGYARYFDRWDAATRSDALRGLAAMGAVQARQAIEGLGAVF ERLEEDPNLLSIEDILDAMNDTDRQRVDGWEEVYYRRSAELARLGLTHYGVDKA >Mature_214_residues MDLTHLRIRRLELDDTRLLFTLANGMRIDEPIQAHRLLLKASPPQRAQWQITEDGFGVNWPAVAPPTPEGLLNMPELLWR RRAARAQAKLTQLRGRMDALSPGERELIALARLDADMNESGYARYFDRWDAATRSDALRGLAAMGAVQARQAIEGLGAVF ERLEEDPNLLSIEDILDAMNDTDRQRVDGWEEVYYRRSAELARLGLTHYGVDKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24291; Mature: 24291
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTHLRIRRLELDDTRLLFTLANGMRIDEPIQAHRLLLKASPPQRAQWQITEDGFGVNW CCCCHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC PAVAPPTPEGLLNMPELLWRRRAARAQAKLTQLRGRMDALSPGERELIALARLDADMNES CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GYARYFDRWDAATRSDALRGLAAMGAVQARQAIEGLGAVFERLEEDPNLLSIEDILDAMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHC DTDRQRVDGWEEVYYRRSAELARLGLTHYGVDKA CCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDLTHLRIRRLELDDTRLLFTLANGMRIDEPIQAHRLLLKASPPQRAQWQITEDGFGVNW CCCCHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC PAVAPPTPEGLLNMPELLWRRRAARAQAKLTQLRGRMDALSPGERELIALARLDADMNES CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC GYARYFDRWDAATRSDALRGLAAMGAVQARQAIEGLGAVFERLEEDPNLLSIEDILDAMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHC DTDRQRVDGWEEVYYRRSAELARLGLTHYGVDKA CCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA