Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 21240946

Identifier: 21240946

GI number: 21240946

Start: 211543

End: 213132

Strand: Direct

Name: 21240946

Synonym: XAC0172

Alternate gene names: NA

Gene position: 211543-213132 (Clockwise)

Preceding gene: 21240945

Following gene: 21240949

Centisome position: 4.09

GC content: 66.23

Gene sequence:

>1590_bases
GTGCGTCTGCGCCTGGCGACGCTTCGCGTTGCGCGCGGCGGCATCGTGGCGCAGCTGCCGATGCAGGTGCAAAACGTGGA
TACCGCTGCCGAGCACATCGCCGCGATCGAAGCGACCGATGCGCAGGGGACGGTGCAACTTGTAGGGCGTGCGGCCAAGG
CGCAGGAAAGCGGTGACCAGGGCCCATTGCGCGTCTGGATCGCGCCACGCGCGCTCAGCGGCCCGCTCAGCCTGCACTAC
CGTGTCCCAGCCAATGCAACCCGGCCGCCGCGCGGCCCGGCACCGCCGATTTCGTTCCGCAACGATGACCATGCCTTTTC
TGCGCTGTCGAGCATGTTTCTGGCACTGCCGCCGCAGGAGCAAAGCTATGCGCTGACCATTCGCTGGGATCTGTCGCAGC
TGCCCGACGGCGCCAAGGGAGTCAGCTCGTTCGGCCAGGGCACGGTGCAGGTCGCGCAGATCGACAACAACAGCTTGTCC
GGTGTGTTCTTCATGGCCGGGGAGGTTGGACGCTGGCCGGCCGTGCCGCGTGCGGACGGGTTTTCGGTCGCCTGGCAGGG
GCAGCCGCCCTTCGATGCGGCCGCGTTGTCCGCGTGGGTGGGCAAGCTGCACGACCAGTTCGAGCTGCTGTTTCCGCAGC
CCGCGCCCGCGCCCTACACGATCTTCCTGCGCTACAACCCGGTCAACGCCGGCGGCGGAACCGCATTGAACCAGTCCTTC
GTCACCACCTATGGCGAAGGCGACGGGGCCGATCTGGACCTGATCAAGATCACCTTGTCGCATGAGATGTTCCATACCTA
CCAGCCGCACCTGTCCCGGCATGGGGCCGAGTCCACGACCTGGTTCAGCGAAGGCTCGGCGGTGTTTTACGAGGCGCTTC
TGCCGCTGCGATTCGGCTTGCTCACCCCGCAGCAATTCCTGGACACGCTTAACACGACCGCGGCGCGTTACTACACCAAT
GCGCTGGGAAATCTGCCGAACGCACGCATCGATGAGGGATTCTGGAAGGACACCCGCATCCGCACGCTCGCCTACGACCG
CGGCATGTTGTATCTGGCCACGGTAAACGATGCGCTGCGCAAGCGATCGCAGGGCAGGCGTTCGCTGGATGACCTGTTGC
GTGCGCTGCTGGAGATCGGGCAGCAGCGCGAGGCAACCCAGGCCGATTGGGAGGCCTTGTTGAAAGCAGAGCTGGGCGAC
ACGGCGGTGCAGGACTTCCACGCCTTCCTGGCCGGAACTGCGCCGCTGCCGGCATCGGATGCGTTCGGGCGGTGCTTCCG
TAGGATCAGCAAGCCGCTGCGGCGCTACGTGCTGGGATTTGAGCCGGCGGTGCTGGCCGAACCCAGGCGCATCGTGCGCG
GCCTGATGGCGGAGTCTGCTGCTGCACAGGCGGGAGTGCGCAATGGCGACGAGATCGTGCGGCCGGTGCCGCAGGACGGC
ATCCAGGGCAATCAGACCCAGCACCTGAAACTGCGCTTGCGCCGCGACGGCAAGGAATTCGACGTGGACTATCTGCCACG
CGGCGAGCAGGTTGACGCCTGGCAATGGGAGCGCGTCCCCGGTGTGGATGATGCACAGTGCCGGCGGTAG

Upstream 100 bases:

>100_bases
TGGCGCAGTGGCCAGCCCGGCGCCTGCAGAGCCTGCTCCGGTTGCGCTGGACCTGGAGCTGGCACCGCACGCAGTCGAGG
GCGACGTGAGCACGGTGGAG

Downstream 100 bases:

>100_bases
ATCGCGCGTTTGGCGTCGACATCAGCACCGCGCCGATGAGGTAGCGGCCAACCCCGCTGCGTCGCCGGCAGTTCAGGCCT
TGTCCACCCCGTAGTGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MRLRLATLRVARGGIVAQLPMQVQNVDTAAEHIAAIEATDAQGTVQLVGRAAKAQESGDQGPLRVWIAPRALSGPLSLHY
RVPANATRPPRGPAPPISFRNDDHAFSALSSMFLALPPQEQSYALTIRWDLSQLPDGAKGVSSFGQGTVQVAQIDNNSLS
GVFFMAGEVGRWPAVPRADGFSVAWQGQPPFDAAALSAWVGKLHDQFELLFPQPAPAPYTIFLRYNPVNAGGGTALNQSF
VTTYGEGDGADLDLIKITLSHEMFHTYQPHLSRHGAESTTWFSEGSAVFYEALLPLRFGLLTPQQFLDTLNTTAARYYTN
ALGNLPNARIDEGFWKDTRIRTLAYDRGMLYLATVNDALRKRSQGRRSLDDLLRALLEIGQQREATQADWEALLKAELGD
TAVQDFHAFLAGTAPLPASDAFGRCFRRISKPLRRYVLGFEPAVLAEPRRIVRGLMAESAAAQAGVRNGDEIVRPVPQDG
IQGNQTQHLKLRLRRDGKEFDVDYLPRGEQVDAWQWERVPGVDDAQCRR

Sequences:

>Translated_529_residues
MRLRLATLRVARGGIVAQLPMQVQNVDTAAEHIAAIEATDAQGTVQLVGRAAKAQESGDQGPLRVWIAPRALSGPLSLHY
RVPANATRPPRGPAPPISFRNDDHAFSALSSMFLALPPQEQSYALTIRWDLSQLPDGAKGVSSFGQGTVQVAQIDNNSLS
GVFFMAGEVGRWPAVPRADGFSVAWQGQPPFDAAALSAWVGKLHDQFELLFPQPAPAPYTIFLRYNPVNAGGGTALNQSF
VTTYGEGDGADLDLIKITLSHEMFHTYQPHLSRHGAESTTWFSEGSAVFYEALLPLRFGLLTPQQFLDTLNTTAARYYTN
ALGNLPNARIDEGFWKDTRIRTLAYDRGMLYLATVNDALRKRSQGRRSLDDLLRALLEIGQQREATQADWEALLKAELGD
TAVQDFHAFLAGTAPLPASDAFGRCFRRISKPLRRYVLGFEPAVLAEPRRIVRGLMAESAAAQAGVRNGDEIVRPVPQDG
IQGNQTQHLKLRLRRDGKEFDVDYLPRGEQVDAWQWERVPGVDDAQCRR
>Mature_529_residues
MRLRLATLRVARGGIVAQLPMQVQNVDTAAEHIAAIEATDAQGTVQLVGRAAKAQESGDQGPLRVWIAPRALSGPLSLHY
RVPANATRPPRGPAPPISFRNDDHAFSALSSMFLALPPQEQSYALTIRWDLSQLPDGAKGVSSFGQGTVQVAQIDNNSLS
GVFFMAGEVGRWPAVPRADGFSVAWQGQPPFDAAALSAWVGKLHDQFELLFPQPAPAPYTIFLRYNPVNAGGGTALNQSF
VTTYGEGDGADLDLIKITLSHEMFHTYQPHLSRHGAESTTWFSEGSAVFYEALLPLRFGLLTPQQFLDTLNTTAARYYTN
ALGNLPNARIDEGFWKDTRIRTLAYDRGMLYLATVNDALRKRSQGRRSLDDLLRALLEIGQQREATQADWEALLKAELGD
TAVQDFHAFLAGTAPLPASDAFGRCFRRISKPLRRYVLGFEPAVLAEPRRIVRGLMAESAAAQAGVRNGDEIVRPVPQDG
IQGNQTQHLKLRLRRDGKEFDVDYLPRGEQVDAWQWERVPGVDDAQCRR

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58217; Mature: 58217

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRLATLRVARGGIVAQLPMQVQNVDTAAEHIAAIEATDAQGTVQLVGRAAKAQESGDQ
CCEEEEEEHHHCCCEEEECCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCC
GPLRVWIAPRALSGPLSLHYRVPANATRPPRGPAPPISFRNDDHAFSALSSMFLALPPQE
CCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCC
QSYALTIRWDLSQLPDGAKGVSSFGQGTVQVAQIDNNSLSGVFFMAGEVGRWPAVPRADG
CCEEEEEEEEHHHCCCCHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCC
FSVAWQGQPPFDAAALSAWVGKLHDQFELLFPQPAPAPYTIFLRYNPVNAGGGTALNQSF
CEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC
VTTYGEGDGADLDLIKITLSHEMFHTYQPHLSRHGAESTTWFSEGSAVFYEALLPLRFGL
EEEECCCCCCCEEEEEEEECHHHHHHHCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHC
LTPQQFLDTLNTTAARYYTNALGNLPNARIDEGFWKDTRIRTLAYDRGMLYLATVNDALR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCHHHH
KRSQGRRSLDDLLRALLEIGQQREATQADWEALLKAELGDTAVQDFHAFLAGTAPLPASD
HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH
AFGRCFRRISKPLRRYVLGFEPAVLAEPRRIVRGLMAESAAAQAGVRNGDEIVRPVPQDG
HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
IQGNQTQHLKLRLRRDGKEFDVDYLPRGEQVDAWQWERVPGVDDAQCRR
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRLRLATLRVARGGIVAQLPMQVQNVDTAAEHIAAIEATDAQGTVQLVGRAAKAQESGDQ
CCEEEEEEHHHCCCEEEECCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCC
GPLRVWIAPRALSGPLSLHYRVPANATRPPRGPAPPISFRNDDHAFSALSSMFLALPPQE
CCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCC
QSYALTIRWDLSQLPDGAKGVSSFGQGTVQVAQIDNNSLSGVFFMAGEVGRWPAVPRADG
CCEEEEEEEEHHHCCCCHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCC
FSVAWQGQPPFDAAALSAWVGKLHDQFELLFPQPAPAPYTIFLRYNPVNAGGGTALNQSF
CEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC
VTTYGEGDGADLDLIKITLSHEMFHTYQPHLSRHGAESTTWFSEGSAVFYEALLPLRFGL
EEEECCCCCCCEEEEEEEECHHHHHHHCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHC
LTPQQFLDTLNTTAARYYTNALGNLPNARIDEGFWKDTRIRTLAYDRGMLYLATVNDALR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCHHHH
KRSQGRRSLDDLLRALLEIGQQREATQADWEALLKAELGDTAVQDFHAFLAGTAPLPASD
HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCH
AFGRCFRRISKPLRRYVLGFEPAVLAEPRRIVRGLMAESAAAQAGVRNGDEIVRPVPQDG
HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
IQGNQTQHLKLRLRRDGKEFDVDYLPRGEQVDAWQWERVPGVDDAQCRR
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA