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The map label for this gene is ygiK [C]

Identifier: 21240938

GI number: 21240938

Start: 201947

End: 203230

Strand: Direct

Name: ygiK [C]

Synonym: XAC0164

Alternate gene names: 21240938

Gene position: 201947-203230 (Clockwise)

Preceding gene: 21240937

Following gene: 21240939

Centisome position: 3.9

GC content: 64.64

Gene sequence:

>1284_bases
ATGGGCATCGCCATGTTGTTGGGCACCTTCGTGGTGCTGCTGCTGATCGGCGTGCCGGTGGCCTACGCCCTGGGCGCGGC
GGCGCTGGCCACGCTGCTGTATCTGGACCTGCCCATGGTGGTGCTGGTGCAGCAGATTTCCGCCGGCAGCGGCTCGGCGT
CGTTGATTGCGATTCCGCTGTTTATCTTCGCCGGCGAGCTGATGCTGCGCGGTGGCATTTCCGAACGCTTGATCGCGTTG
GCCTCGTCCTTGGTCGGGCGTGTCCGCGGTGGCCTGGGCCAAGTCAGCGTGCTGTCGTCGCTGTTCTTCGGCGGCGTCTC
CGGCTCGGCGATTGCCGATGTCTCGGCAGTCGGCGGCACCATGATTCCGCAGATGATCAAGCGCGGTTACGACCGCGATT
ACGCGGTCAATGTGAGCATGACCGCTGCGCTGGTGGCCTTGCTGGTGCCGCCTTCGCATAACCTGATCCTGTTCTCGGCC
GCGGCCGGTGGCGGCTTGTCGATTGCCGATCTGTTCGCGGCCGGCATCTTCCCCGCGTTGTTGATGACCGCCGCGATGAT
GGTGACCGGCTATGCGGTGGCGCGCCATCGCGGCTACGGCACCGAAGCCTTTCCTGGTTGGCGTGCGGTGGCCTTGCGCC
TGATCGGCGCGCTGCCCGGCCTGGGGCTGGTCGGGTTGATCTTCATCGGGATTCGCGCCGGCATCTTCACCGCGGTGGAA
AGCGCCGCCATTGCGGTGGTGTACGCATTGATCGTCACCGCGTTGTTGTATCGCCAATTGCGTTGGGCCGAGTTCTTCGC
TGCGGTGACGCATGCGGCGCGCACCACCGGCGTGATCCTGTTCGTGATCGCCACCGCTGCTGTGTTCGGCTGGTTGCTGG
CCTATCTGCAGGTACCTGCAGCGGCGGTGAAGTTCCTGCAGGCCATTGCCGACAGCAAGAACACGGTGCTGCTGATGATC
GTGGTGATGCTGCTGTTGCTGGGCATGTTCATGGACCTGGCGCCGAAGATCCTGATCTGCACGCCGATCTTCCTGCCGGT
GGTCAAGGCCTACGGCATCGACCCGATCCACTTCGGCCTGGTGATGGTGTTGGCCGGCGGTATCGGCCTGATCACGCCGC
CGATCGGCTCGGTGTTGTTCATCGGCACCTCCATCGGGCAGATCACCATCGCGCAAAGCATGCGCACCATCTGGCCGTTC
TGGCTGGCGGCGTTGTGCGTGCTGTTGATCGTGGCGTTTTTCCCTGAGTTGTCGCTGTGGCTGCCGCGCGCCCTGCGCGC
CTGA

Upstream 100 bases:

>100_bases
ACTACCTGCCGCTGTCGATCGGCGGTGCGCTGATGGTGCTGTTTGCCGTGTTCAAGTTGTGGCGTGTGCTGCGCCCGGTC
CATGTCGGAGGAGTGCGCTG

Downstream 100 bases:

>100_bases
GCCGGGGTAACTGCGTGATGGCATGACTGGCAGACGGGCGATCGGTACGGCTTGTTCGCGTCGTATCGATCGCCTGCCAT
CCACCTGCAAGCGTGCCAGA

Product: C4-dicarboxylate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MGIAMLLGTFVVLLLIGVPVAYALGAAALATLLYLDLPMVVLVQQISAGSGSASLIAIPLFIFAGELMLRGGISERLIAL
ASSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGGTMIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSA
AAGGGLSIADLFAAGIFPALLMTAAMMVTGYAVARHRGYGTEAFPGWRAVALRLIGALPGLGLVGLIFIGIRAGIFTAVE
SAAIAVVYALIVTALLYRQLRWAEFFAAVTHAARTTGVILFVIATAAVFGWLLAYLQVPAAAVKFLQAIADSKNTVLLMI
VVMLLLLGMFMDLAPKILICTPIFLPVVKAYGIDPIHFGLVMVLAGGIGLITPPIGSVLFIGTSIGQITIAQSMRTIWPF
WLAALCVLLIVAFFPELSLWLPRALRA

Sequences:

>Translated_427_residues
MGIAMLLGTFVVLLLIGVPVAYALGAAALATLLYLDLPMVVLVQQISAGSGSASLIAIPLFIFAGELMLRGGISERLIAL
ASSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGGTMIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSA
AAGGGLSIADLFAAGIFPALLMTAAMMVTGYAVARHRGYGTEAFPGWRAVALRLIGALPGLGLVGLIFIGIRAGIFTAVE
SAAIAVVYALIVTALLYRQLRWAEFFAAVTHAARTTGVILFVIATAAVFGWLLAYLQVPAAAVKFLQAIADSKNTVLLMI
VVMLLLLGMFMDLAPKILICTPIFLPVVKAYGIDPIHFGLVMVLAGGIGLITPPIGSVLFIGTSIGQITIAQSMRTIWPF
WLAALCVLLIVAFFPELSLWLPRALRA
>Mature_426_residues
GIAMLLGTFVVLLLIGVPVAYALGAAALATLLYLDLPMVVLVQQISAGSGSASLIAIPLFIFAGELMLRGGISERLIALA
SSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGGTMIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSAA
AGGGLSIADLFAAGIFPALLMTAAMMVTGYAVARHRGYGTEAFPGWRAVALRLIGALPGLGLVGLIFIGIRAGIFTAVES
AAIAVVYALIVTALLYRQLRWAEFFAAVTHAARTTGVILFVIATAAVFGWLLAYLQVPAAAVKFLQAIADSKNTVLLMIV
VMLLLLGMFMDLAPKILICTPIFLPVVKAYGIDPIHFGLVMVLAGGIGLITPPIGSVLFIGTSIGQITIAQSMRTIWPFW
LAALCVLLIVAFFPELSLWLPRALRA

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=418, Percent_Identity=35.4066985645933, Blast_Score=224, Evalue=8e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44552; Mature: 44420

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAMLLGTFVVLLLIGVPVAYALGAAALATLLYLDLPMVVLVQQISAGSGSASLIAIPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FIFAGELMLRGGISERLIALASSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGGT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHH
MIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSAAAGGGLSIADLFAAGIFPAL
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LMTAAMMVTGYAVARHRGYGTEAFPGWRAVALRLIGALPGLGLVGLIFIGIRAGIFTAVE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SAAIAVVYALIVTALLYRQLRWAEFFAAVTHAARTTGVILFVIATAAVFGWLLAYLQVPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKFLQAIADSKNTVLLMIVVMLLLLGMFMDLAPKILICTPIFLPVVKAYGIDPIHFGL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH
VMVLAGGIGLITPPIGSVLFIGTSIGQITIAQSMRTIWPFWLAALCVLLIVAFFPELSLW
HHHHHCCCCEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRALRA
HHHHHCC
>Mature Secondary Structure 
GIAMLLGTFVVLLLIGVPVAYALGAAALATLLYLDLPMVVLVQQISAGSGSASLIAIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FIFAGELMLRGGISERLIALASSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGGT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHH
MIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSAAAGGGLSIADLFAAGIFPAL
HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LMTAAMMVTGYAVARHRGYGTEAFPGWRAVALRLIGALPGLGLVGLIFIGIRAGIFTAVE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SAAIAVVYALIVTALLYRQLRWAEFFAAVTHAARTTGVILFVIATAAVFGWLLAYLQVPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKFLQAIADSKNTVLLMIVVMLLLLGMFMDLAPKILICTPIFLPVVKAYGIDPIHFGL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH
VMVLAGGIGLITPPIGSVLFIGTSIGQITIAQSMRTIWPFWLAALCVLLIVAFFPELSLW
HHHHHCCCCEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRALRA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]