| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cbbFC [H]
Identifier: 21240898
GI number: 21240898
Start: 145882
End: 146892
Strand: Reverse
Name: cbbFC [H]
Synonym: XAC0124
Alternate gene names: 21240898
Gene position: 146892-145882 (Counterclockwise)
Preceding gene: 21240899
Following gene: 21240897
Centisome position: 2.84
GC content: 64.69
Gene sequence:
>1011_bases ATGTCGCGTCCCTCGCTGACCCGCTTCCTGATCGAAGAGCAACACGCCGGCCGTATCGATGCGGAATTGCGCCAGCTGAT CACCATCGTCTCGCGCGCCTGCAAGCGCATCTCCATCGCCGTGAGCAAGGGCGCTCTGGGCGGCGTGCTCGGCGATGCCG GCACCGGCAACGTGCAGGGCGAAGCACAGAAGAAACTCGATGTACTCAGCAACGACATCCTGCTCGAGGCCAACGCCTGG GGCGGCCATCTGGCCGCGTGCGCGTCCGAAGAAATGGACCACAGCCAGCCGGTGCCCGACCAATACCCCAGCGGCGATTT CCTGCTGTTGTTCGATCCCTTGGACGGCAGCTCCAATATCGACGTCAATGTCTCGGTGGGCACGATCTTCTCGGTATTGC GCGCGCCCAAGGGCACCGAAAAGCCGGGCGACGAGCACTTCCTGCAGCCGGGCACCCAACAGGTCGCCGCCGGCTACTGC ATCTACGGCCCCAGCACCATGCTGGTGCTCACGCTGGGCCACGGCACCCACGCCTTCACCCTGGAGCGCGAAGAAGGCAG CTTCCTGCTGACCCAGGCCAACATGCGCGTGCCCGAAGACACCGCCGAATACGCCATCAACATGTCCAACCAACGCCACT GGGAACCGGCGATGCAGGCCTACGTGGGCGACCTGCTGGCCGGCAAGGACGGCGCGCGCGGCAAGGACTTCAACATGCGC TGGATCGCCAGCATGGTCGCCGACGTGCATCGCATCCTCACCCGCGGCGGCATCTTCATCTACCCGTGGGACAAAAAAGA CCCGAGCAAGCCGGGCAAGCTGCGCCTGATGTACGAAGCCAACCCGATGAGCATGCTGGTGGAACAGGCCGGCGGCGCGG CAACCACCGGGCGCGAACGCATTCTCGACATCCAGCCGACACAGCTGCACCAGCGCGTGCCGGTGTTCCTGGGCTCGAAG AACGAAGTGGCCGAAGCAACGCGGTATCACCTGGATGCCGACAAGGCCTAA
Upstream 100 bases:
>100_bases ATTCGATCACCGGCGATGCAAACCGCGCATCAAGTGATCGAAATCTAACGCCGCAATGGCGACAATGGCGGCCCACTTCC TACACAGGCTGCCCGTTCCC
Downstream 100 bases:
>100_bases GGCTGCGGGTACCGCTCGCAAGGCACGCAAACTGGATCCCACCAAGACACCCGCCCCGCGCGGGTGTCTTGGTTTATGAC CCCCGCTGATGGATCATCTC
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAW GGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYC IYGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLLAGKDGARGKDFNMR WIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQPTQLHQRVPVFLGSK NEVAEATRYHLDADKA
Sequences:
>Translated_336_residues MSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAW GGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYC IYGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLLAGKDGARGKDFNMR WIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQPTQLHQRVPVFLGSK NEVAEATRYHLDADKA >Mature_335_residues SRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWG GHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYCI YGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLLAGKDGARGKDFNMRW IASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQPTQLHQRVPVFLGSKN EVAEATRYHLDADKA
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=329, Percent_Identity=44.3768996960486, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI16579888, Length=329, Percent_Identity=44.3768996960486, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI22907028, Length=321, Percent_Identity=39.8753894080997, Blast_Score=233, Evalue=2e-61, Organism=Escherichia coli, GI1790679, Length=328, Percent_Identity=44.8170731707317, Blast_Score=259, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=44.9848024316109, Blast_Score=260, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6323409, Length=322, Percent_Identity=40.3726708074534, Blast_Score=231, Evalue=2e-61, Organism=Drosophila melanogaster, GI19921562, Length=327, Percent_Identity=45.565749235474, Blast_Score=261, Evalue=4e-70, Organism=Drosophila melanogaster, GI45550998, Length=327, Percent_Identity=45.565749235474, Blast_Score=261, Evalue=5e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 36654; Mature: 36523
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQG CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCC EAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCE DVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYCIYGPSTMLVLTLGHGTHAFT EEEEEHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCEEEECCCEEEEEEECCCCEEEE LEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLLAGKDGARGKDFNMR EEECCCCEEEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH WIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRER HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCE ILDIQPTQLHQRVPVFLGSKNEVAEATRYHLDADKA EEECCHHHHHCCCCEEECCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGALGGVLGDAGTGNVQG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCC EAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCE DVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYCIYGPSTMLVLTLGHGTHAFT EEEEEHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCEEEECCCEEEEEEECCCCEEEE LEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLLAGKDGARGKDFNMR EEECCCCEEEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH WIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRER HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCE ILDIQPTQLHQRVPVFLGSKNEVAEATRYHLDADKA EEECCHHHHHCCCCEEECCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA