| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240891
Identifier: 21240891
GI number: 21240891
Start: 136986
End: 137882
Strand: Reverse
Name: 21240891
Synonym: XAC0117
Alternate gene names: NA
Gene position: 137882-136986 (Counterclockwise)
Preceding gene: 21240892
Following gene: 21240890
Centisome position: 2.66
GC content: 68.78
Gene sequence:
>897_bases GTGAGCGTGGACGTGCCGGCATTGATTCCCAGCCACGTACGCAGCCGCCTGCGTGGTCTGCAGCTGCGTGCGCGTCACGC ACAGGGTGCGCACGACATCGGCCAACACGCCAGCCGCAGCCGTGGCGCCGGGCTGGAATTCGCGCAATACCGCGCCTATG AACCGGGCGATGCGCTGCGCCAGATCGACTGGAAGCTCTACGCGCGCTCGGACCGCTTCTTCGTGCGCGAAGCCGAGCGC GAAAGCCCGCTGACGCTGTGGTTGGTGCTCGATGCCACTGCCTCCGCCGGCCAGGCCGATCACGCGCGCCCCGGCGGCAC GCGTCTGCACACCATGGCGACGCTGGCGGCCTGCGCGGCAGAGATCGCGCTGCAGCAGGGCGATCAGGTCGGCCTGTTCG CGGTACACGGCGGCGGGCTGGTGGCAGTGCCGGCCGGCGCCGGGCCGCGTCAACGCGACCGGCTATGGCTGGCCCTGCAT GGATTGCGCGCTGGGGGGCGTTGGCCGGGCATGACCGCCGTACGCCCGCTGTGGGAACGCATCGCCACGCATGCGCTGGT GCTGTCGATCGGCGATGGCTTCGACGAAGACCTGAATATTGCATTGGAAAAACTCGCTGCCGCACGCCGCCAGGTCATGC AACTGCAGGTGCTGACCTGCGACGAACGCGATTTCGGTTTCAGCGGCGGGCACCGGTTTCGCGATCCGGAAACCGGCGAA GAATTGCTGGGCGATGGCGCGGCCATGCGCGCCGATTATCTGCAACGCTTCGGTGCTGCACAACGCGCGCAACAGGCGCG CTGGCGGGCCGCCGGCATCGCACATGCACTGCAGTATCTGGACGCTGCACCCGACGCGGCGTTGCGCCAGTTGTTCGGGC AAGGCGCGCAGCGATGA
Upstream 100 bases:
>100_bases TTGCTCTCGTTCGCCGCCGAGGCCGAACAACGCACGGCCGACGACGTGGTCGCCGCATTGCTGCGTGCCGTGCCATTCCC GGCGTGAGGCCTAGCGCGGC
Downstream 100 bases:
>100_bases GCTGGCAGGTCGGCCGCGAGCATGTCGCCAGGCGGGTGCCGCGATGAACTTGCTGTTGCTTTTCCCCGCCGGCCTGGCGG CGTTGGCCGCGTTGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSVDVPALIPSHVRSRLRGLQLRARHAQGAHDIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAER ESPLTLWLVLDATASAGQADHARPGGTRLHTMATLAACAAEIALQQGDQVGLFAVHGGGLVAVPAGAGPRQRDRLWLALH GLRAGGRWPGMTAVRPLWERIATHALVLSIGDGFDEDLNIALEKLAAARRQVMQLQVLTCDERDFGFSGGHRFRDPETGE ELLGDGAAMRADYLQRFGAAQRAQQARWRAAGIAHALQYLDAAPDAALRQLFGQGAQR
Sequences:
>Translated_298_residues MSVDVPALIPSHVRSRLRGLQLRARHAQGAHDIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAER ESPLTLWLVLDATASAGQADHARPGGTRLHTMATLAACAAEIALQQGDQVGLFAVHGGGLVAVPAGAGPRQRDRLWLALH GLRAGGRWPGMTAVRPLWERIATHALVLSIGDGFDEDLNIALEKLAAARRQVMQLQVLTCDERDFGFSGGHRFRDPETGE ELLGDGAAMRADYLQRFGAAQRAQQARWRAAGIAHALQYLDAAPDAALRQLFGQGAQR >Mature_297_residues SVDVPALIPSHVRSRLRGLQLRARHAQGAHDIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAERE SPLTLWLVLDATASAGQADHARPGGTRLHTMATLAACAAEIALQQGDQVGLFAVHGGGLVAVPAGAGPRQRDRLWLALHG LRAGGRWPGMTAVRPLWERIATHALVLSIGDGFDEDLNIALEKLAAARRQVMQLQVLTCDERDFGFSGGHRFRDPETGEE LLGDGAAMRADYLQRFGAAQRAQQARWRAAGIAHALQYLDAAPDAALRQLFGQGAQR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32485; Mature: 32354
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDVPALIPSHVRSRLRGLQLRARHAQGAHDIGQHASRSRGAGLEFAQYRAYEPGDALR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHH QIDWKLYARSDRFFVREAERESPLTLWLVLDATASAGQADHARPGGTRLHTMATLAACAA HHHHHEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH EIALQQGDQVGLFAVHGGGLVAVPAGAGPRQRDRLWLALHGLRAGGRWPGMTAVRPLWER HHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH IATHALVLSIGDGFDEDLNIALEKLAAARRQVMQLQVLTCDERDFGFSGGHRFRDPETGE HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHH ELLGDGAAMRADYLQRFGAAQRAQQARWRAAGIAHALQYLDAAPDAALRQLFGQGAQR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure SVDVPALIPSHVRSRLRGLQLRARHAQGAHDIGQHASRSRGAGLEFAQYRAYEPGDALR CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHH QIDWKLYARSDRFFVREAERESPLTLWLVLDATASAGQADHARPGGTRLHTMATLAACAA HHHHHEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH EIALQQGDQVGLFAVHGGGLVAVPAGAGPRQRDRLWLALHGLRAGGRWPGMTAVRPLWER HHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH IATHALVLSIGDGFDEDLNIALEKLAAARRQVMQLQVLTCDERDFGFSGGHRFRDPETGE HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHH ELLGDGAAMRADYLQRFGAAQRAQQARWRAAGIAHALQYLDAAPDAALRQLFGQGAQR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA