| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240871
Identifier: 21240871
GI number: 21240871
Start: 113716
End: 114354
Strand: Reverse
Name: 21240871
Synonym: XAC0097
Alternate gene names: NA
Gene position: 114354-113716 (Counterclockwise)
Preceding gene: 21240872
Following gene: 21240870
Centisome position: 2.21
GC content: 50.39
Gene sequence:
>639_bases ATGCGCTTCCCCCGAGCAGCCCTGCTCTTCCTAACCGCACTCTGCGCACCTGCACTAAGTGCTTGTGCCCATGGACCACT GAAGCCGCTTCCGAAGGAGCACGCTGACATGACTTTGCCAGAGGCTGTCACCGGCGACAAAATTACGCTTAGCGCTGAAG AAATAGGCAATCGGTTCTTGAAACTGATCAAGGGGCTAGACTCCCGTGATGACCTGAATCCCGAACGTATCCGGGAAGTG ATGGGGATCACTCTTAAGAAACCAGATCCAGCAGAGCTGTCAGTGGCGTACTGGAGCATCGATCTGCAAGATGGGTGGCG CTATGCATTTACCTATGTTCCGGAATCGCCCTCGCTTTTAAAAGGCGTGGACTTGACTTTTCAAAACGATAAAGACGATT GGTCTAATATGTCTGCTGTCTGCGGGCTTGATTTTGATCATTATGACAAGGCACTTGAAGCAATGGGCTTTAATGCCTCA CCTACTTACGGACCGATTGGTCAGCTTGAGGATTGGCGTTACACAAAATTTGCAAAAGATGGAGTTGGGGGGGATATCGC TATTTCCGTTGTCCCGAGGAACATTGTGGTCCGTGAGCCTGGTCGACTTTGCGTCAAATCTATCGGTACGTTGAACTAA
Upstream 100 bases:
>100_bases TGGCAACGCCTAGCCCGCAACTCGAAGCAGCTCTCGCCAGCTTTTCTACATATGAATTCACACATTGTATGCTGCGTCTG TCACCCCTTAGGATCTGCTA
Downstream 100 bases:
>100_bases TCAACAAGGAACGAAAGATGGCAGCCGTCAGCCCCCAACTCGAAGCAGCGCTTGCCCGTTTTTCAACTGATCCAAGTGTG ACGCGGGATCAAGCACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN
Sequences:
>Translated_212_residues MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN >Mature_212_residues MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23385; Mature: 23385
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH KLIKGLDSRDDLNPERIREVMGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLL HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHH KGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNASPTYGPIGQLEDWRYTKFAKD HCCCEEECCCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC GVGGDIAISVVPRNIVVREPGRLCVKSIGTLN CCCCEEEEEEECCEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH KLIKGLDSRDDLNPERIREVMGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLL HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHH KGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNASPTYGPIGQLEDWRYTKFAKD HCCCEEECCCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC GVGGDIAISVVPRNIVVREPGRLCVKSIGTLN CCCCEEEEEEECCEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA