Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21240871

Identifier: 21240871

GI number: 21240871

Start: 113716

End: 114354

Strand: Reverse

Name: 21240871

Synonym: XAC0097

Alternate gene names: NA

Gene position: 114354-113716 (Counterclockwise)

Preceding gene: 21240872

Following gene: 21240870

Centisome position: 2.21

GC content: 50.39

Gene sequence:

>639_bases
ATGCGCTTCCCCCGAGCAGCCCTGCTCTTCCTAACCGCACTCTGCGCACCTGCACTAAGTGCTTGTGCCCATGGACCACT
GAAGCCGCTTCCGAAGGAGCACGCTGACATGACTTTGCCAGAGGCTGTCACCGGCGACAAAATTACGCTTAGCGCTGAAG
AAATAGGCAATCGGTTCTTGAAACTGATCAAGGGGCTAGACTCCCGTGATGACCTGAATCCCGAACGTATCCGGGAAGTG
ATGGGGATCACTCTTAAGAAACCAGATCCAGCAGAGCTGTCAGTGGCGTACTGGAGCATCGATCTGCAAGATGGGTGGCG
CTATGCATTTACCTATGTTCCGGAATCGCCCTCGCTTTTAAAAGGCGTGGACTTGACTTTTCAAAACGATAAAGACGATT
GGTCTAATATGTCTGCTGTCTGCGGGCTTGATTTTGATCATTATGACAAGGCACTTGAAGCAATGGGCTTTAATGCCTCA
CCTACTTACGGACCGATTGGTCAGCTTGAGGATTGGCGTTACACAAAATTTGCAAAAGATGGAGTTGGGGGGGATATCGC
TATTTCCGTTGTCCCGAGGAACATTGTGGTCCGTGAGCCTGGTCGACTTTGCGTCAAATCTATCGGTACGTTGAACTAA

Upstream 100 bases:

>100_bases
TGGCAACGCCTAGCCCGCAACTCGAAGCAGCTCTCGCCAGCTTTTCTACATATGAATTCACACATTGTATGCTGCGTCTG
TCACCCCTTAGGATCTGCTA

Downstream 100 bases:

>100_bases
TCAACAAGGAACGAAAGATGGCAGCCGTCAGCCCCCAACTCGAAGCAGCGCTTGCCCGTTTTTCAACTGATCCAAGTGTG
ACGCGGGATCAAGCACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV
MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS
PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN

Sequences:

>Translated_212_residues
MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV
MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS
PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN
>Mature_212_residues
MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFLKLIKGLDSRDDLNPERIREV
MGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLLKGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNAS
PTYGPIGQLEDWRYTKFAKDGVGGDIAISVVPRNIVVREPGRLCVKSIGTLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23385; Mature: 23385

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
KLIKGLDSRDDLNPERIREVMGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLL
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHH
KGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNASPTYGPIGQLEDWRYTKFAKD
HCCCEEECCCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC
GVGGDIAISVVPRNIVVREPGRLCVKSIGTLN
CCCCEEEEEEECCEEEEECCHHHHHHHHCCCC
>Mature Secondary Structure
MRFPRAALLFLTALCAPALSACAHGPLKPLPKEHADMTLPEAVTGDKITLSAEEIGNRFL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH
KLIKGLDSRDDLNPERIREVMGITLKKPDPAELSVAYWSIDLQDGWRYAFTYVPESPSLL
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHH
KGVDLTFQNDKDDWSNMSAVCGLDFDHYDKALEAMGFNASPTYGPIGQLEDWRYTKFAKD
HCCCEEECCCCCCHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC
GVGGDIAISVVPRNIVVREPGRLCVKSIGTLN
CCCCEEEEEEECCEEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA