| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21240870
Identifier: 21240870
GI number: 21240870
Start: 111806
End: 113746
Strand: Reverse
Name: 21240870
Synonym: XAC0096
Alternate gene names: NA
Gene position: 113746-111806 (Counterclockwise)
Preceding gene: 21240871
Following gene: 21240869
Centisome position: 2.2
GC content: 56.05
Gene sequence:
>1941_bases TTGCGTCAAATCTATCGGTACGTTGAACTAATCAACAAGGAACGAAAGATGGCAGCCGTCAGCCCCCAACTCGAAGCAGC GCTTGCCCGTTTTTCAACTGATCCAAGTGTGACGCGGGATCAAGCACAGCAACTGCGCACGGCAATTATCTCCAACACAA CGCTTTTCAAAGAGTTCGAGAAAGAGGCTAAACAAGGGCATTTGCAGGGATTTTCCTTACAGTCATCAGCCAATAGAGCC CCAAATTTGGTGGGCAGTTACGACATGCAAAGCGGAGTTATCACGCTCCCGACGGCAAGCTTTCAGCCAGCAGGCACAAC TCCTAGTAGTGATTTAAAGGCTACGCTGCAAGTCCAACATATGACTCTGGGGTTTGCTCGGAGCACGTATCAAGATGCGG CTAGAGTCAGTCATCCTGTGACGCAGGATATGGTGGACAACTTGCAGTCCACGCTAAACAAATCACCGTTCCTTGCTGAT CAGCTTAAGAAAGCGGCAACCACCGTCGATCCTTCGGATCCATCAAGTCCGAAACGTGCACAACTTGAGAGCTTTGGATT TGTTGGACCGGGTGTCTCCGCCGGCGGGACCTATGATGGCAACAACAGGGTTATGAATTTGCCGCCGATTGGCTTACAGA CAGCATCTGCCAGCAACCCTCAGGGCAGATTCTCTGAGAAAGATATGGTGTTCGTACTTGGGCATGAAATTCAACACAGC TTTAATCATGCGGATAAAACAAAAGCCACCGCCAACTTTCTGAATGATGTAAGGAGTCAGGCAGTCGCCAAGACTCCTGT GCACGACTACACCAACGAGCTGCGTTCGTATATCCAGTCGGGACGCGAGGACGAAGCGAAAGCAGAAATCGCGGGTTGGA ATGCGTTACTCAGCCACGAAAGACAGTCTAATCCGACTGCCAATGGCCTTGATCTCATGTTAAACACCAAGAATGCGAGG ACGCTAGATTTCGTGCACAGGGATCCGCTTACCACTAAGGCAGTGGCAAACCCTGGCCTCGGCTTCAATCAGGACGGGAG TCTTGCCCAAACGCCCAGCAATATTGCGGCAATGGGTCAAAACTACTTCGACCGTCCATCTCCCCTCTACGCGCAGCCAG GCCAGCGCCCGGTAGGCCTCGGCGAGCACCGCAATCAAGCCGGCCAGCTGCAGCCCACTGCGGATTACACCAATTACTAT GGCACCTGGGCTGTAGAGCAGATCCTGCAGGCCGAAGATCGCGCGAACGTGATGTATCAAGGTGCCCGGCCGCAAGTGAC CATCGATATGGCAGCGCTGGGGCTCAAAGAACATTTGATCGAGAACGAAGGGCTGGACCGAGGCGTCAACAAGTCACCGT TTCCGTATCAGGACACAAGTACCCGGCCGCCCACGCTGCATCATTTCGACCATACCCAGGATGGAAGCGTGAATCCCGCG CACGACCATACCTATGTTCCGGTTGTGCCCAGTGCGCCTGCTGCAACGGGCTCGCTCGGGCCGGACGATCCTGCGCACCC GGATCACCGCATGCTGGAGCAGATTCGCAGTGGTGTCCGCAAGATCGACGAGAGTGTGGGCAAGCCGTACGACGACATGA GCGAGCGCGTCAGCCGTAGCCTGCTGGCCGTGTGCAAAGACAACCGCGAGGCCTACCCGGCTGCGGGGGATCGCTCGCTG GCAGACAATGCGTTGAGCCGCGTGGACCATGTTGTGATGGGCAAGACCGGCAACATGTTTGCGGTAGAAGGGCGGCTGGA TGACCCAGCGCACAGGCGGGTGCACGTGGAGATCGACCAGGCAATCCGCACCCCGGTGGAACAGTCGGACCAGAAACTCC TGGCGGCCAACCAAGCCATTGCGCAGGAAAGGGCGCTGACGCAGCAGCAAGAGGTGGCGCGTGGAATGAACGAGCCTAAC CAGGGCAGCCTGTCCCGCTAG
Upstream 100 bases:
>100_bases AGGATTGGCGTTACACAAAATTTGCAAAAGATGGAGTTGGGGGGGATATCGCTATTTCCGTTGTCCCGAGGAACATTGTG GTCCGTGAGCCTGGTCGACT
Downstream 100 bases:
>100_bases ATCGCACGCTTGCGGAGCACCACGACGCCATCAGAGCCCGATGGCGGTCTGCGTTGCATCACCTCACACCGCTTGATACA CGCCAAACCCGCAGTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MRQIYRYVELINKERKMAAVSPQLEAALARFSTDPSVTRDQAQQLRTAIISNTTLFKEFEKEAKQGHLQGFSLQSSANRA PNLVGSYDMQSGVITLPTASFQPAGTTPSSDLKATLQVQHMTLGFARSTYQDAARVSHPVTQDMVDNLQSTLNKSPFLAD QLKKAATTVDPSDPSSPKRAQLESFGFVGPGVSAGGTYDGNNRVMNLPPIGLQTASASNPQGRFSEKDMVFVLGHEIQHS FNHADKTKATANFLNDVRSQAVAKTPVHDYTNELRSYIQSGREDEAKAEIAGWNALLSHERQSNPTANGLDLMLNTKNAR TLDFVHRDPLTTKAVANPGLGFNQDGSLAQTPSNIAAMGQNYFDRPSPLYAQPGQRPVGLGEHRNQAGQLQPTADYTNYY GTWAVEQILQAEDRANVMYQGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPA HDHTYVPVVPSAPAATGSLGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSL ADNALSRVDHVVMGKTGNMFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQEVARGMNEPN QGSLSR
Sequences:
>Translated_646_residues MRQIYRYVELINKERKMAAVSPQLEAALARFSTDPSVTRDQAQQLRTAIISNTTLFKEFEKEAKQGHLQGFSLQSSANRA PNLVGSYDMQSGVITLPTASFQPAGTTPSSDLKATLQVQHMTLGFARSTYQDAARVSHPVTQDMVDNLQSTLNKSPFLAD QLKKAATTVDPSDPSSPKRAQLESFGFVGPGVSAGGTYDGNNRVMNLPPIGLQTASASNPQGRFSEKDMVFVLGHEIQHS FNHADKTKATANFLNDVRSQAVAKTPVHDYTNELRSYIQSGREDEAKAEIAGWNALLSHERQSNPTANGLDLMLNTKNAR TLDFVHRDPLTTKAVANPGLGFNQDGSLAQTPSNIAAMGQNYFDRPSPLYAQPGQRPVGLGEHRNQAGQLQPTADYTNYY GTWAVEQILQAEDRANVMYQGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPA HDHTYVPVVPSAPAATGSLGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSL ADNALSRVDHVVMGKTGNMFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQEVARGMNEPN QGSLSR >Mature_646_residues MRQIYRYVELINKERKMAAVSPQLEAALARFSTDPSVTRDQAQQLRTAIISNTTLFKEFEKEAKQGHLQGFSLQSSANRA PNLVGSYDMQSGVITLPTASFQPAGTTPSSDLKATLQVQHMTLGFARSTYQDAARVSHPVTQDMVDNLQSTLNKSPFLAD QLKKAATTVDPSDPSSPKRAQLESFGFVGPGVSAGGTYDGNNRVMNLPPIGLQTASASNPQGRFSEKDMVFVLGHEIQHS FNHADKTKATANFLNDVRSQAVAKTPVHDYTNELRSYIQSGREDEAKAEIAGWNALLSHERQSNPTANGLDLMLNTKNAR TLDFVHRDPLTTKAVANPGLGFNQDGSLAQTPSNIAAMGQNYFDRPSPLYAQPGQRPVGLGEHRNQAGQLQPTADYTNYY GTWAVEQILQAEDRANVMYQGARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPA HDHTYVPVVPSAPAATGSLGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRSLLAVCKDNREAYPAAGDRSL ADNALSRVDHVVMGKTGNMFAVEGRLDDPAHRRVHVEIDQAIRTPVEQSDQKLLAANQAIAQERALTQQQEVARGMNEPN QGSLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70711; Mature: 70711
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIYRYVELINKERKMAAVSPQLEAALARFSTDPSVTRDQAQQLRTAIISNTTLFKEFE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KEAKQGHLQGFSLQSSANRAPNLVGSYDMQSGVITLPTASFQPAGTTPSSDLKATLQVQH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEH MTLGFARSTYQDAARVSHPVTQDMVDNLQSTLNKSPFLADQLKKAATTVDPSDPSSPKRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHH QLESFGFVGPGVSAGGTYDGNNRVMNLPPIGLQTASASNPQGRFSEKDMVFVLGHEIQHS HHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHH FNHADKTKATANFLNDVRSQAVAKTPVHDYTNELRSYIQSGREDEAKAEIAGWNALLSHE HCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RQSNPTANGLDLMLNTKNARTLDFVHRDPLTTKAVANPGLGFNQDGSLAQTPSNIAAMGQ HCCCCCCCCEEEEEECCCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCC NYFDRPSPLYAQPGQRPVGLGEHRNQAGQLQPTADYTNYYGTWAVEQILQAEDRANVMYQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE GARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPA CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HDHTYVPVVPSAPAATGSLGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRS CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLAVCKDNREAYPAAGDRSLADNALSRVDHVVMGKTGNMFAVEGRLDDPAHRRVHVEIDQ HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEEEEHHH AIRTPVEQSDQKLLAANQAIAQERALTQQQEVARGMNEPNQGSLSR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRQIYRYVELINKERKMAAVSPQLEAALARFSTDPSVTRDQAQQLRTAIISNTTLFKEFE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KEAKQGHLQGFSLQSSANRAPNLVGSYDMQSGVITLPTASFQPAGTTPSSDLKATLQVQH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEH MTLGFARSTYQDAARVSHPVTQDMVDNLQSTLNKSPFLADQLKKAATTVDPSDPSSPKRA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHH QLESFGFVGPGVSAGGTYDGNNRVMNLPPIGLQTASASNPQGRFSEKDMVFVLGHEIQHS HHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHH FNHADKTKATANFLNDVRSQAVAKTPVHDYTNELRSYIQSGREDEAKAEIAGWNALLSHE HCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RQSNPTANGLDLMLNTKNARTLDFVHRDPLTTKAVANPGLGFNQDGSLAQTPSNIAAMGQ HCCCCCCCCEEEEEECCCCCEEEHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCC NYFDRPSPLYAQPGQRPVGLGEHRNQAGQLQPTADYTNYYGTWAVEQILQAEDRANVMYQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE GARPQVTIDMAALGLKEHLIENEGLDRGVNKSPFPYQDTSTRPPTLHHFDHTQDGSVNPA CCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HDHTYVPVVPSAPAATGSLGPDDPAHPDHRMLEQIRSGVRKIDESVGKPYDDMSERVSRS CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLAVCKDNREAYPAAGDRSLADNALSRVDHVVMGKTGNMFAVEGRLDDPAHRRVHVEIDQ HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEEEEHHH AIRTPVEQSDQKLLAANQAIAQERALTQQQEVARGMNEPNQGSLSR HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA