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The map label for this gene is yusZ [H]

Identifier: 21240856

GI number: 21240856

Start: 100185

End: 101084

Strand: Reverse

Name: yusZ [H]

Synonym: XAC0082

Alternate gene names: 21240856

Gene position: 101084-100185 (Counterclockwise)

Preceding gene: 21240857

Following gene: 21240852

Centisome position: 1.95

GC content: 69.11

Gene sequence:

>900_bases
ATGAGCAAACGCATTCTGGTGACTGGCGCGTCCAGCGGCTTTGGCCGATTGGCCGCGCAAGCGCTGGCCGCCGCCGGCCA
CACCGTCTACGCCTCCATGCGCGATACCGCCGGCCGCAATGCCGGCGTGGCGCAGGAGATGGCCGACTTGGCGTGCAAGC
AGCAGCTGGCCTTGCACGCGCTAGAGCTGGACGTGCAATCGCAGGCCTCGGCCGACGCGGCGGTGGCATCCATCGTGGCG
CAGGCCGGTGGGCTGGACGTGGTGGTGCACAACGCCGGGCACATGGTGTTCGGCCCGGCCGAAGCGTTCACCGCCGAACA
GCTGGCGCACGTCTACGACATCAACGTGCTGGGCACCCAGCGGGTCAACCGCGCGGCATTGCCGCAATTGCGGGCACAGC
AGCAGGGCCTGTTGGTGTGGGTGTCCAGCAGCAGCTCGGCAGGCGGCACCCCCCCGTATCTGGGCCCTTACTTCGCGGCC
AAGGCGGCGATGGATGCCTTGGCGGTGCAGTACGCACGCGAGTTGACGCGCTGGGGCATCGAGACCTCGATCATCGTGCC
CGGCGCCTTCACCAAGGGCACCAACCACTTCGCCCATGCCGGGACGCCGGACGATGCCGCGCGCGCCGCTGCGTACGAGG
CCGGCCCGTATGCGGGCTTTGGCGAACAGGTGCAGCAGGCGTTTGCGCGCCTGGTGCCCGAAGACGCCGACGTGGCCGAG
GTGGCGCAGGCGATCGTGCAGGTGGTGAACGCACCGTTCGGCAAGCGGCCATTCCGGGTGCATATCGACCCGGCGGGCGA
TGGCGCCGAGGTGGGCTTCGCGGTCCTCGATCGCCTGCGTGCAGAGATGCTGCACCGTGTGGGATTGGACGACCTGTTGG
CACCGCGCGTGGTGGAATGA

Upstream 100 bases:

>100_bases
TCAACGGCCAGGTCCTGCGCGCCAACGGCGGCATGGTCTGACCCGCTGCGGCGCGCTGCAGTGCGCACGCTGCTGGTTTT
CCCCCTCGAGGAGCAATGAC

Downstream 100 bases:

>100_bases
TGGGATGCGGCAGGCGCTTGGAGCGCCTGCCGGCCATAGAGCGGCGAACAGGCCGTGGCGAGCCGTCGTCCGCTGGATGT
GGACGGCGCACTCACAACCG

Product: short chain oxidoreductase

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQEMADLACKQQLALHALELDVQSQASADAAVASIVA
QAGGLDVVVHNAGHMVFGPAEAFTAEQLAHVYDINVLGTQRVNRAALPQLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAA
KAAMDALAVQYARELTRWGIETSIIVPGAFTKGTNHFAHAGTPDDAARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
VAQAIVQVVNAPFGKRPFRVHIDPAGDGAEVGFAVLDRLRAEMLHRVGLDDLLAPRVVE

Sequences:

>Translated_299_residues
MSKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQEMADLACKQQLALHALELDVQSQASADAAVASIVA
QAGGLDVVVHNAGHMVFGPAEAFTAEQLAHVYDINVLGTQRVNRAALPQLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAA
KAAMDALAVQYARELTRWGIETSIIVPGAFTKGTNHFAHAGTPDDAARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
VAQAIVQVVNAPFGKRPFRVHIDPAGDGAEVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
>Mature_298_residues
SKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQEMADLACKQQLALHALELDVQSQASADAAVASIVAQ
AGGLDVVVHNAGHMVFGPAEAFTAEQLAHVYDINVLGTQRVNRAALPQLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAAK
AAMDALAVQYARELTRWGIETSIIVPGAFTKGTNHFAHAGTPDDAARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAEV
AQAIVQVVNAPFGKRPFRVHIDPAGDGAEVGFAVLDRLRAEMLHRVGLDDLLAPRVVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI223718074, Length=189, Percent_Identity=35.4497354497354, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI119392083, Length=191, Percent_Identity=31.413612565445, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=30.3664921465969, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4504503, Length=210, Percent_Identity=30, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI44680136, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI44680133, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI17738292, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI22507405, Length=192, Percent_Identity=30.2083333333333, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI19743808, Length=201, Percent_Identity=27.363184079602, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI20149619, Length=206, Percent_Identity=29.126213592233, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786701, Length=239, Percent_Identity=27.1966527196653, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787820, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI2367175, Length=235, Percent_Identity=29.3617021276596, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082100, Length=204, Percent_Identity=28.4313725490196, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787335, Length=183, Percent_Identity=27.8688524590164, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17557780, Length=204, Percent_Identity=30.3921568627451, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=241, Percent_Identity=29.045643153527, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115534660, Length=241, Percent_Identity=28.2157676348548, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=27.0161290322581, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=215, Percent_Identity=27.4418604651163, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=26.5625, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=196, Percent_Identity=30.6122448979592, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24651139, Length=198, Percent_Identity=32.8282828282828, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571387, Length=191, Percent_Identity=28.7958115183246, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397609, Length=208, Percent_Identity=32.2115384615385, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357041, Length=190, Percent_Identity=31.0526315789474, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=30.327868852459, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21355319, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31232; Mature: 31100

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQEMADLACKQQLALHA
CCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LELDVQSQASADAAVASIVAQAGGLDVVVHNAGHMVFGPAEAFTAEQLAHVYDINVLGTQ
HHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHHHHHHHEEEEECCH
RVNRAALPQLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAAKAAMDALAVQYARELTRWGI
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIIVPGAFTKGTNHFAHAGTPDDAARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VAQAIVQVVNAPFGKRPFRVHIDPAGDGAEVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure 
SKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQEMADLACKQQLALHA
CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LELDVQSQASADAAVASIVAQAGGLDVVVHNAGHMVFGPAEAFTAEQLAHVYDINVLGTQ
HHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHHHHHHHEEEEECCH
RVNRAALPQLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAAKAAMDALAVQYARELTRWGI
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIIVPGAFTKGTNHFAHAGTPDDAARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VAQAIVQVVNAPFGKRPFRVHIDPAGDGAEVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
HHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]