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The map label for this gene is yibP [H]

Identifier: 21240798

GI number: 21240798

Start: 25882

End: 27117

Strand: Reverse

Name: yibP [H]

Synonym: XAC0024

Alternate gene names: 21240798

Gene position: 27117-25882 (Counterclockwise)

Preceding gene: 21240801

Following gene: 21240797

Centisome position: 0.52

GC content: 67.56

Gene sequence:

>1236_bases
ATGTGGCTGGCGGTGGGCGTGCTGGCCTGCACCTTGCTGGGCAGCATGGGCGCAAGCGCGCAGAGCCAGCGCGAGACCGA
GCGCAAATTGCAGCAGCTGCGCGATGAGCTCAAGACCATCAGCGCCGATCGACGCGAACTGGAAGGCAAGCGCGGCACCG
CCGCGCAACAGTTGCGCCAGGCCGACGAGAAAGTGGCCAAGACCGCACGTGCATTGAGCGAGACCGAAGCGGCGATGCGC
GCGCAGGAACAGCATCTGTCCACCCTGCAGCAGGAACGCGCGCAATTGCAGCGCGGCCTGCAGAACCAGCGCGCGCAGCT
GGCGGCGTTATTGCGCGCCGCCGATCAGGTGGGCCGCAATGCACCGCTGAAGGTGCTGCTGTCGCAGGACACGGTGGGCG
ATGCCACGCGTATGCTGGCCGATCACCGCTATGTGCAAAACGCACGCGCGCAGCGCATCCACGCCTTGACCACGCAACTG
GATGCCCTGGCGACAGTGGAACAGGACATCGCCACCCGGCGCCAGGCGCTGGATGCCGCGCGTGCGCAGCAAAAAGCGCA
GGCGGCCACGTTGCAGAAGGATCGCTCGCAACAGGCGGCCACCGTCGCGCAGCTGGACGATCGCTACAAACAGCGCGCCG
AGCGCGAAAAGGCAATCGGCCAGGACGCCAAGGCGCTGGAACAACTGCTCGCCAATCTGCGCGCGGCCGCCGCCAAGGCC
GAAGCCGAACGGCGCGCTGCCGCCAGACGCGCCGCCGCCGAAGCCGCCGCACAGGCCAAGCGCAGCAAAACCGAGCGTTC
CGATCGCCCCGGCAAGACGCCATCCAAGGTAGTCGCCAACGCACCGGCCCCCAAGGTCGGTGGGCTCAGCTGGCCGGTGG
CGGGCAATCTGCTGGCGCGCTTCAATGCCACCTTGCCCGATGGCCACACCAGCAAGGGCGTGCTGATCGGCGCGCCCAAG
GGCACCACCGTGACTGCAGTGGCCGATGGCACGGTGGTGTTTTCCGACTGGATGACCGGCTACGGCATGATCCTGATCGT
GGACCACGGCAACGGCTACATGAGCCTGTACGCGCATAACGACACCTTGCTGCGCGATGCCGGCGCAACGATCAAACGTG
GCGACGCGGTGGCCAAGGTCGGCAGTTCGGGCGGGCAGGGCGTGCCGGCGCTGTACTTCGAATTGCGTCGCAACGGGCAG
CCGGTGGATCCATCGAGCTGGCTGCAACGCCGCTGA

Upstream 100 bases:

>100_bases
ACAATCGCGCACCTGCCTGAAGTCACTGGATCTTTCGTTGCCCCCTTCGCCCGCACCGCTGCCGCGCCTGCCGCTCGCTC
CTGCCACCGGCCGTGGACGG

Downstream 100 bases:

>100_bases
GCGCCGCGCACCGCCCGCGATTCAACGCGGATTTACCGCTGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGC
CTTATCTCTTTGTCGGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MWLAVGVLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DALATVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPSKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Sequences:

>Translated_411_residues
MWLAVGVLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DALATVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPSKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR
>Mature_411_residues
MWLAVGVLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMR
AQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQL
DALATVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
EAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPSKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPK
GTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQ
PVDPSSWLQRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=425, Percent_Identity=32.9411764705882, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=37.7049180327869, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87082174, Length=183, Percent_Identity=29.5081967213115, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI87081989, Length=93, Percent_Identity=35.4838709677419, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44338; Mature: 44338

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLAVGVLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALSETEAAMRAQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLDALATVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPSKVVANAPAPKVGGLSWPVAGNLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
HCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MWLAVGVLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ADEKVAKTARALSETEAAMRAQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APLKVLLSQDTVGDATRMLADHRYVQNARAQRIHALTTQLDALATVEQDIATRRQALDAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPSKVVANAPAPKVGGLSWPVAGNLLAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
FNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHN
HCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECC
DTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CHHHHHCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]