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The map label for this gene is ctp [H]

Identifier: 21240797

GI number: 21240797

Start: 24251

End: 25777

Strand: Reverse

Name: ctp [H]

Synonym: XAC0023

Alternate gene names: 21240797

Gene position: 25777-24251 (Counterclockwise)

Preceding gene: 21240798

Following gene: 21240793

Centisome position: 0.5

GC content: 68.5

Gene sequence:

>1527_bases
ATGCGCGTAGCCGTCCTGTCCGTTGCCCTGTCGCTGGCCCTGTTCGCGTCGCCTGGTTGGGCGCAGAAGGCCGGCCCCGC
CGCCGCCCAGGCCAGCGCGGACGATCCGGAAGCCAATGAAGCCGCTGTTTCCAAGGTGCCGCTGGATGAGATCCGCCGTT
TCGTGGCGGTGTACAACGCGGTCAAGCAGGCCTACGTCGACCCGGTCGAAGACAAGAAGCTGATGCACGCCGCCGTGCGT
GGCCTGCTCTCGGACCTGGACCCGCACAGCACCTATTTCGACAAGGAAGATGCCGAAGCCTTCGACGAACAGGCCACCGG
CGCCTACGACGGCATCGGCGTGGAATTGCTGCAGCAGCAGGACAACACCCTCAAGGTGATCGCGCCGATCGACGACACCC
CGGCCGCGCGCGCCGGCATCCGCGCCGGCGATGTGATCGTGGCCATCGACGGCAAGCCGATCGATGCCAGCAAGGCCATG
GAGCCGCTGCGTGGCGAATCCGGCAGCAAGGTCGTGTTGACCATCATGCGCGACAAGATGCCCAAGCCGTTCGATGTGAC
CCTGCAGCGCGAAACCATCCGCGTGGCCAGCGTGCGCAGCAAGCTGCTGGAGCCGGGCTTTGGCTACATCCGCATCAGCA
CCTTCCAGGCCGACACCGGCGCCGACTTCCAGAAGAACCTCAAGCAGCTGCAGGCCGGCGGCAAGTTGCGCGGCCTGGTG
CTGGATCTGCGCAGCAACCCCGGCGGTCTGCTGACCTCGGCGGTGCAGGTGGCCGACGATCTGCTGGACAAGGGCAATAT
CGTCAGCACGCGCGGGCGCATCTCCATCAGCGATGCCAAGTTCGACGCCACTCCGGGTGATCTGCTCAATGGCGCACCGG
TGGTGGTGCTGGTGGACGCCGGCTCGGCCAGTGCCTCGGAGGTGCTGGCCGGCGCGCTGCGCGACAACAAGCGCGCACGC
ATCATCGGCAGCCGCACCTTCGGCAAGGGCTCGGTGCAGACCGTGCTGCCGCTGGACAACGGCGACTCGGTCAAGCTCAC
CACCGCGCGCTATTACACGCCCAGCGGCAAGTCGATCCAGGCCAGCGGCATCGTGCCGGACGTGCTGCTCACCCCCGAAC
CGCAGCCGGGCGATGCCGATGTGCCGGCCAGCCTGACCGACTACAGCGAAGCCACCTTGCCGGGCCACCTGCGCGGCGAC
GACGAAGGCGAGGAGGGCTACAGCGCCGGCGACGTGCTGCCGGGCGACGGCCCGATCACCGAAGCCTTGGCCGAACTCAA
GCAACCCGGCGCCGCCGCCAAGGCGCAGGCTGCACGCAAAGCCAAGGCGCAGGCCGCGCAGAAGGCGAAGGCCGCCAATA
AGACCGGTGCCGAGCCCAAGCCCGCCGCAGCGCGCCCGGCGACCACGGACAAGCCCAGGTCGGCCGAACCGGCAGGCAAG
GCCAAGCCGGCCACTACACCCCCAGCGCCAGCCGAACCGGTGCAGCCGACGACGCCGACGGACAAGCCTGCCGAGCCGGT
CAACTAA

Upstream 100 bases:

>100_bases
CGCGCACCGCCCGCGATTCAACGCGGATTTACCGCTGCTTCGCGCATAATCCGGTCAGCTCCGCGCTGCGGGGCGCCTTA
TCTCTTTGTCGGAGTGCTTC

Downstream 100 bases:

>100_bases
GCGTGGGCAACAGACCTGCGCGCGGCGTCGTGACGTAGGTCCGGTCGGCACACAGGAATCGGTGGAGGAGTGGTACATGC
CACACCGAGCCTCGGGCCTC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKMPKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPITEALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGK
AKPATTPPAPAEPVQPTTPTDKPAEPVN

Sequences:

>Translated_508_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKMPKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPITEALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGK
AKPATTPPAPAEPVQPTTPTDKPAEPVN
>Mature_508_residues
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVR
GLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAM
EPLRGESGSKVVLTIMRDKMPKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDAGSASASEVLAGALRDNKRAR
IIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGD
DEGEEGYSAGDVLPGDGPITEALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGK
AKPATTPPAPAEPVQPTTPTDKPAEPVN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=327, Percent_Identity=31.1926605504587, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52874; Mature: 52874

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIMRDKM
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHCC
PKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHCCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEE
ASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDDEGEEGYSAGDVLPGDGPIT
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPATTPPAPAEPVQPTTPTDKPAEPVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNA
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHH
VKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQ
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCC
DNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIMRDKM
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHCC
PKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLV
CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
LDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDA
EEECCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHCCCCCEEEEEEC
GSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQ
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEE
ASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDDEGEEGYSAGDVLPGDGPIT
ECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPATTPPAPAEPVQPTTPTDKPAEPVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]