Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228836

Identifier: 21228836

GI number: 21228836

Start: 3273727

End: 3274029

Strand: Reverse

Name: 21228836

Synonym: MM_2734

Alternate gene names: NA

Gene position: 3274029-3273727 (Counterclockwise)

Preceding gene: 21228837

Following gene: 21228835

Centisome position: 79.93

GC content: 43.23

Gene sequence:

>303_bases
ATGGACCTGGCACTTACCCTTGTAGAAAACGTGATGAAGTATATCCGCAAGTTCTCAGGCATTGACGAAGCGTCTCGCGT
TGGTGGATCTGACATGATGGAAAAGTTTTGTGAACTGGGCAGGACTGAAGAAGGCCAAAAATTTTACCCATACTTCAGGG
AGAGGCTTCATAAACTATACCGTGATTCGGAAGATAGCCCTTACGGGATTGGAGACAATTTACGATATTATATCTCCAAT
CTGGTTGACGATATCTCTAATCCTGATGACAACTTTTTCGAAGAAGACCTGCAGGACAATTGA

Upstream 100 bases:

>100_bases
TTTACTATCACCCGCGGGGAGCGGCTAGCATGCCTCGTTATTCAGTAGCAAAAAAACTATCAACGACTATTCTGCGGCTT
CCGGAGATATTAAGGGGACA

Downstream 100 bases:

>100_bases
TCGTCAGCTCTTACCTTTTTTTGATACTTGTTTAAGCTTCATTCTTCATGTTTCATACTCAGATTTCATATTTTTTCCTT
TTTTTCAGATTTGAAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN
LVDDISNPDDNFFEEDLQDN

Sequences:

>Translated_100_residues
MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN
LVDDISNPDDNFFEEDLQDN
>Mature_100_residues
MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN
LVDDISNPDDNFFEEDLQDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11781; Mature: 11781

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLY
CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDSEDSPYGIGDNLRYYISNLVDDISNPDDNFFEEDLQDN
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLY
CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDSEDSPYGIGDNLRYYISNLVDDISNPDDNFFEEDLQDN
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA