| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228710
Identifier: 21228710
GI number: 21228710
Start: 3104795
End: 3105115
Strand: Reverse
Name: 21228710
Synonym: MM_2608
Alternate gene names: NA
Gene position: 3105115-3104795 (Counterclockwise)
Preceding gene: 21228712
Following gene: 21228709
Centisome position: 75.8
GC content: 38.01
Gene sequence:
>321_bases TTGAAAATAAAGAAATATATCAACATGCAAACCGCAGAAGAAAGGGAAGAGCTGTTTCGCAAAATTTCCTCTTTTCTAAA AAAATACGGGGCAACCAGAGTATCCATTTTCGGATCTTATGTTAGGGGTGAAGAGAAACCGGAAAGCGATATAGATGTTC TGGTCGAGTTTGCTGATAGAAAAAGCTTGCTGACTCTGGTTAATATCGAACTGGAACTCTCGGATTATCTGGGAATTAAG GTTGACCTGCTGACTGAAAAATCGATAAGTCCTTACCTGATAGATGGAATAAAAAAAGAGGCTAAAGTGATATCTGAATG A
Upstream 100 bases:
>100_bases AGCGTAGCGAAAAGGACACCGCCCTCCCGAGGCGGGACTCGGGAAGGACAGCGGACTTCCGAGGCGGGACTCGGGTGGCA AAACTCGGGGAAAGTTTAAA
Downstream 100 bases:
>100_bases AAAGGGATGATAGGGTATATCTTAGCCACATCCTCTTATCTACTTCCTTAATTGAAAAATACACAGCGAATTTAACTGAA GAAGAGTTTCTGTCAAATAG
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKIKKYINMQTAEEREELFRKISSFLKKYGATRVSIFGSYVRGEEKPESDIDVLVEFADRKSLLTLVNIELELSDYLGIK VDLLTEKSISPYLIDGIKKEAKVISE
Sequences:
>Translated_106_residues MKIKKYINMQTAEEREELFRKISSFLKKYGATRVSIFGSYVRGEEKPESDIDVLVEFADRKSLLTLVNIELELSDYLGIK VDLLTEKSISPYLIDGIKKEAKVISE >Mature_106_residues MKIKKYINMQTAEEREELFRKISSFLKKYGATRVSIFGSYVRGEEKPESDIDVLVEFADRKSLLTLVNIELELSDYLGIK VDLLTEKSISPYLIDGIKKEAKVISE
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 12193; Mature: 12193
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKYINMQTAEEREELFRKISSFLKKYGATRVSIFGSYVRGEEKPESDIDVLVEFADR CCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCC KSLLTLVNIELELSDYLGIKVDLLTEKSISPYLIDGIKKEAKVISE CCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIKKYINMQTAEEREELFRKISSFLKKYGATRVSIFGSYVRGEEKPESDIDVLVEFADR CCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCC KSLLTLVNIELELSDYLGIKVDLLTEKSISPYLIDGIKKEAKVISE CCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]