Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228682

Identifier: 21228682

GI number: 21228682

Start: 3070001

End: 3070258

Strand: Reverse

Name: 21228682

Synonym: MM_2580

Alternate gene names: NA

Gene position: 3070258-3070001 (Counterclockwise)

Preceding gene: 21228684

Following gene: 21228681

Centisome position: 74.95

GC content: 36.05

Gene sequence:

>258_bases
TTGTTTTTTTGGGTAATAACGGTTACTGTTAGAGATTTCTGCCATGTTCAGGAAGCAGGTAAAGCGCTATTTTTTGTTAC
AAAAAACACACATGATATTCTTGGAATAACATGCCCAAAAAATGAAAATCCTTTTCACTTAGCTTTTTTGATAATAGAAC
TCCATCATTACCTTTGGACAGGAAGGTTGTTTTTACTTTGGTTCTCCGAAGCCGTCAAAAAACTAACCATTGAATTGCCA
TCGAAGGCCCAGATGTGA

Upstream 100 bases:

>100_bases
AATTTTGCACCTGTGGGCACAGAGACTGCAGTGTACTTTATCGTCTCCGATCTTTTCGTAGAACATGGCTTCCTTTATCA
CATAAATCCCCATTTAGTGA

Downstream 100 bases:

>100_bases
CCTTGATCACGGATGCCAAATTGCCTTTGAAGCAATTCTACTGTCCTGGAAATGATGGAGTAATGTAAATTGGACGGAGA
AATAAACAAATCTTGTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MFFWVITVTVRDFCHVQEAGKALFFVTKNTHDILGITCPKNENPFHLAFLIIELHHYLWTGRLFLLWFSEAVKKLTIELP
SKAQM

Sequences:

>Translated_85_residues
MFFWVITVTVRDFCHVQEAGKALFFVTKNTHDILGITCPKNENPFHLAFLIIELHHYLWTGRLFLLWFSEAVKKLTIELP
SKAQM
>Mature_85_residues
MFFWVITVTVRDFCHVQEAGKALFFVTKNTHDILGITCPKNENPFHLAFLIIELHHYLWTGRLFLLWFSEAVKKLTIELP
SKAQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9993; Mature: 9993

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFWVITVTVRDFCHVQEAGKALFFVTKNTHDILGITCPKNENPFHLAFLIIELHHYLWT
CEEEEEEEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHH
GRLFLLWFSEAVKKLTIELPSKAQM
HHHHHHHHHHHHHEEEEECCCCCCC
>Mature Secondary Structure
MFFWVITVTVRDFCHVQEAGKALFFVTKNTHDILGITCPKNENPFHLAFLIIELHHYLWT
CEEEEEEEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHH
GRLFLLWFSEAVKKLTIELPSKAQM
HHHHHHHHHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA