| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228631
Identifier: 21228631
GI number: 21228631
Start: 3015010
End: 3015423
Strand: Reverse
Name: 21228631
Synonym: MM_2529
Alternate gene names: NA
Gene position: 3015423-3015010 (Counterclockwise)
Preceding gene: 21228632
Following gene: 21228630
Centisome position: 73.61
GC content: 48.31
Gene sequence:
>414_bases TTGGGAACGCCTGTAGAGACAGAAACGTTTGAGGAGATAGAGACTCCTTTTGAAACAGAAACAGCTGAAGAAACGCTGAC TCCGGAAGGCGCTGGCACAATTGCAGAAGGGCAAACCGAAAACCTGACGGAAGAAGAAACCTCGCAGCCTGCGGAAACCG AACCGAGAACGTACCTCGTAAGGCTCAGGGAATATGTGATCATCCCTTCGGAGCTGGAAATCAATGTAGGGGATCTCGTG GTATGGAGAAACTTTGAAGATAGCGTTTTTACCCTGACCAGCGAGGAAGGGCTTTTCGAGGACCAGAGGCTAGGATACGG GAACACCTTTAATTACACATTCACTGAAACCGGCAACTACAGTTTCAGCGTTAGCGGATATCCGAACATGCGAATGACCA TCACTGTAAAATAA
Upstream 100 bases:
>100_bases AGATGAAGATTCCGGGGATTCAGGAAGTTCCGGAGGGTATTCTGGAGGGCAGAGATACGAGGAAGTGCAAACAGCAGAAG AAACAATAACATCAGAAGAA
Downstream 100 bases:
>100_bases TATCCCAAAGTATAGCAACTTTAGATGATCTGTAGAACTATAGTGGAAGGGACAACAAAGATATCGGTTCCGGTCCCGCC TCCGGATGCAAATTTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGTPVETETFEEIETPFETETAEETLTPEGAGTIAEGQTENLTEEETSQPAETEPRTYLVRLREYVIIPSELEINVGDLV VWRNFEDSVFTLTSEEGLFEDQRLGYGNTFNYTFTETGNYSFSVSGYPNMRMTITVK
Sequences:
>Translated_137_residues MGTPVETETFEEIETPFETETAEETLTPEGAGTIAEGQTENLTEEETSQPAETEPRTYLVRLREYVIIPSELEINVGDLV VWRNFEDSVFTLTSEEGLFEDQRLGYGNTFNYTFTETGNYSFSVSGYPNMRMTITVK >Mature_136_residues GTPVETETFEEIETPFETETAEETLTPEGAGTIAEGQTENLTEEETSQPAETEPRTYLVRLREYVIIPSELEINVGDLVV WRNFEDSVFTLTSEEGLFEDQRLGYGNTFNYTFTETGNYSFSVSGYPNMRMTITVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15534; Mature: 15403
Theoretical pI: Translated: 3.64; Mature: 3.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPVETETFEEIETPFETETAEETLTPEGAGTIAEGQTENLTEEETSQPAETEPRTYLV CCCCCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHEEE RLREYVIIPSELEINVGDLVVWRNFEDSVFTLTSEEGLFEDQRLGYGNTFNYTFTETGNY EEEHEEEECCCCEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCE SFSVSGYPNMRMTITVK EEEECCCCCEEEEEEEC >Mature Secondary Structure GTPVETETFEEIETPFETETAEETLTPEGAGTIAEGQTENLTEEETSQPAETEPRTYLV CCCCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHEEE RLREYVIIPSELEINVGDLVVWRNFEDSVFTLTSEEGLFEDQRLGYGNTFNYTFTETGNY EEEHEEEECCCCEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCE SFSVSGYPNMRMTITVK EEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA