Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228577

Identifier: 21228577

GI number: 21228577

Start: 2953443

End: 2953682

Strand: Reverse

Name: 21228577

Synonym: MM_2475

Alternate gene names: NA

Gene position: 2953682-2953443 (Counterclockwise)

Preceding gene: 21228578

Following gene: 21228576

Centisome position: 72.11

GC content: 45.0

Gene sequence:

>240_bases
ATGCCAACAAGAACGATCAGCATAAGTGAGGAAGCCTACGAGAGACTCAAAAGCCTCAAAACTTCCGAGAAAGACAGCTT
CTCGGATGTGATCCTCAAGTACTATCCCAGAAAAAGAAAATTATCAGAAGTGCTCGCAGAAATAGGCTCCAATCCCGAAC
TCGCAGATGCAATCGAGAAAGCTTCCAGAGACATGAGAAAAGCAAAGATGAGGAACGTTGATCTTGATGCCGGTGCTTGA

Upstream 100 bases:

>100_bases
TTTTTTAAAGAAATCCTGGTTTTTTCAATATTTCATTATCCCTTACCAAATTCTTGCTATCCGAAAAACTTCAAGTACAC
ATACATACACAGATACTATT

Downstream 100 bases:

>100_bases
TACTTCTTTTATTGTAGATCTCCTGAGAGGCAAAAGAGGAGCTCTTCAGAAACTGGCTGAAATGGAAGCTCAGGAATCCC
CTTAAGCAAAACCGAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MPTRTISISEEAYERLKSLKTSEKDSFSDVILKYYPRKRKLSEVLAEIGSNPELADAIEKASRDMRKAKMRNVDLDAGA

Sequences:

>Translated_79_residues
MPTRTISISEEAYERLKSLKTSEKDSFSDVILKYYPRKRKLSEVLAEIGSNPELADAIEKASRDMRKAKMRNVDLDAGA
>Mature_78_residues
PTRTISISEEAYERLKSLKTSEKDSFSDVILKYYPRKRKLSEVLAEIGSNPELADAIEKASRDMRKAKMRNVDLDAGA

Specific function: Unknown

COG id: COG1753

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0330 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2475_METMA (Q8PU66)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_634499.1
- GeneID:   1480817
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_2475
- NMPDR:   fig|192952.1.peg.2475
- HOGENOM:   HBG542190
- OMA:   AFADTIG
- ProtClustDB:   PRK13696
- BioCyc:   MMAZ192952:MM2475-MONOMER
- HAMAP:   MF_00794
- InterPro:   IPR003847
- ProDom:   PD188822

Pfam domain/function: PF02697 DUF217

EC number: NA

Molecular weight: Translated: 8963; Mature: 8832

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTRTISISEEAYERLKSLKTSEKDSFSDVILKYYPRKRKLSEVLAEIGSNPELADAIEK
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
ASRDMRKAKMRNVDLDAGA
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PTRTISISEEAYERLKSLKTSEKDSFSDVILKYYPRKRKLSEVLAEIGSNPELADAIEK
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
ASRDMRKAKMRNVDLDAGA
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824