Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228511

Identifier: 21228511

GI number: 21228511

Start: 2870639

End: 2871538

Strand: Direct

Name: 21228511

Synonym: MM_2409

Alternate gene names: NA

Gene position: 2870639-2871538 (Clockwise)

Preceding gene: 21228509

Following gene: 21228512

Centisome position: 70.08

GC content: 36.78

Gene sequence:

>900_bases
ATGGTTAAGAACAAAATAACAATAGGAGTAATTCTTTTGACAATGCTGGTTGGCATGGCATTGATACCACCAGTGAGTGC
AGTAGAGGTGCAACAGAATATTACGGAAAAAGAGAATCAAGATAATATATCTGTCCCTGATCCTTGGTTTGAAAAAGGTG
ACGAGTTAAATCGGCTTAGCGGGGATGAACGTCGCGCCCTTGCTGAACAAAATGAAACGGTAAGAAAAATGATTGAGGAA
GATCTAAAAGTTAAACCTGTACAGATTGAAAGCCTTAAGGATTTGGAAAATCTCCCTACTAATTATCCTGAAGATATAAA
AAAGGCAGTAATAGAAAATTTTACATCAAGAAATATTAGTCAACAAACCTCAACCAAAGCAACAACGACAACAAATACGG
TTAATGTTTGGATAGTTGCAGATGAAGAGTACCGGAGTACTTTCGGAAATAACTGGCAGACTCAAGCATACAACACCATC
GAAAATGCTGACAACGCATTCTACAACGACCATAATATAGATTTTGTTGTAGGCAAATATTCAATATGGGATAGTAATGA
CAATACAGATGATGTCGTTTTACTTCTCAATGAAGCAAAAAGTGAAACTGGATGGAATTCTAATCATCAAGGCATGGATA
TGCTTGCCGTTTTCAGTGATCAGGGATTAAGTAATAGAGGTTATTCTGAGTATCTAACTGGTGCATGGATAATGCAACAT
CAAATAACTTCAGGTTGGGATTGGCATGTTGCACAGCATGAAGCGTCACACAGCTATGATTGTCGAGATCATGGATATGC
TGGTCCAACATGCATAATGACATACACGTTTATGATGTCGACAGATAATTGGTGCAGTAATTGCGATCAAATTATTGAAA
CTAATAGAAATATTTTTTAA

Upstream 100 bases:

>100_bases
CTCCACAAAATAAGCCCCTAAGAGGCAGTGATTATGTTAGCTTTTCTGTATTTAAGCTTGCCTGATTTTCGCCTCCTGGG
TGCTAAACAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
ATCGTTTCATGCAGGATTTAATCCTACATTTATTTTTATAGTGTGCTTGGAGAATTTATTAAATGAAAGCAAGGACAAAA
ATTTTAGCAGCTATTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVKNKITIGVILLTMLVGMALIPPVSAVEVQQNITEKENQDNISVPDPWFEKGDELNRLSGDERRALAEQNETVRKMIEE
DLKVKPVQIESLKDLENLPTNYPEDIKKAVIENFTSRNISQQTSTKATTTTNTVNVWIVADEEYRSTFGNNWQTQAYNTI
ENADNAFYNDHNIDFVVGKYSIWDSNDNTDDVVLLLNEAKSETGWNSNHQGMDMLAVFSDQGLSNRGYSEYLTGAWIMQH
QITSGWDWHVAQHEASHSYDCRDHGYAGPTCIMTYTFMMSTDNWCSNCDQIIETNRNIF

Sequences:

>Translated_299_residues
MVKNKITIGVILLTMLVGMALIPPVSAVEVQQNITEKENQDNISVPDPWFEKGDELNRLSGDERRALAEQNETVRKMIEE
DLKVKPVQIESLKDLENLPTNYPEDIKKAVIENFTSRNISQQTSTKATTTTNTVNVWIVADEEYRSTFGNNWQTQAYNTI
ENADNAFYNDHNIDFVVGKYSIWDSNDNTDDVVLLLNEAKSETGWNSNHQGMDMLAVFSDQGLSNRGYSEYLTGAWIMQH
QITSGWDWHVAQHEASHSYDCRDHGYAGPTCIMTYTFMMSTDNWCSNCDQIIETNRNIF
>Mature_299_residues
MVKNKITIGVILLTMLVGMALIPPVSAVEVQQNITEKENQDNISVPDPWFEKGDELNRLSGDERRALAEQNETVRKMIEE
DLKVKPVQIESLKDLENLPTNYPEDIKKAVIENFTSRNISQQTSTKATTTTNTVNVWIVADEEYRSTFGNNWQTQAYNTI
ENADNAFYNDHNIDFVVGKYSIWDSNDNTDDVVLLLNEAKSETGWNSNHQGMDMLAVFSDQGLSNRGYSEYLTGAWIMQH
QITSGWDWHVAQHEASHSYDCRDHGYAGPTCIMTYTFMMSTDNWCSNCDQIIETNRNIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34128; Mature: 34128

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNKITIGVILLTMLVGMALIPPVSAVEVQQNITEKENQDNISVPDPWFEKGDELNRLS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCC
GDERRALAEQNETVRKMIEEDLKVKPVQIESLKDLENLPTNYPEDIKKAVIENFTSRNIS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
QQTSTKATTTTNTVNVWIVADEEYRSTFGNNWQTQAYNTIENADNAFYNDHNIDFVVGKY
HHHCCCCEEECCEEEEEEEECHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCCEEEEEEE
SIWDSNDNTDDVVLLLNEAKSETGWNSNHQGMDMLAVFSDQGLSNRGYSEYLTGAWIMQH
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEH
QITSGWDWHVAQHEASHSYDCRDHGYAGPTCIMTYTFMMSTDNWCSNCDQIIETNRNIF
HCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKNKITIGVILLTMLVGMALIPPVSAVEVQQNITEKENQDNISVPDPWFEKGDELNRLS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCC
GDERRALAEQNETVRKMIEEDLKVKPVQIESLKDLENLPTNYPEDIKKAVIENFTSRNIS
CHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
QQTSTKATTTTNTVNVWIVADEEYRSTFGNNWQTQAYNTIENADNAFYNDHNIDFVVGKY
HHHCCCCEEECCEEEEEEEECHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCCEEEEEEE
SIWDSNDNTDDVVLLLNEAKSETGWNSNHQGMDMLAVFSDQGLSNRGYSEYLTGAWIMQH
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEH
QITSGWDWHVAQHEASHSYDCRDHGYAGPTCIMTYTFMMSTDNWCSNCDQIIETNRNIF
HCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA