| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228477
Identifier: 21228477
GI number: 21228477
Start: 2832077
End: 2832580
Strand: Direct
Name: 21228477
Synonym: MM_2375
Alternate gene names: NA
Gene position: 2832077-2832580 (Clockwise)
Preceding gene: 21228473
Following gene: 21228480
Centisome position: 69.14
GC content: 45.44
Gene sequence:
>504_bases ATGTGGCAGACATTACTCAAAAAATTTGAAAAATATCCTGCGCAAGCAAAAGTGCTTAAACTTCTCTTTGAACGCGGCTT CCAGGTAAACGAGGAAGGAAAAGTAACTTCCGGATCAATAGAGATCGCACACACACAGCTCGCAAAGGAAGTAGGCGTTG ACCGGAGAGTGGTCGATGCAACCACAAAGACCATCATTTCTGACGAACTTCTGAGTACTATTTTTAAAAATGTTCATTCC ATACCCTTCCTCAGGGATGTCGCTCCTTCTCTGGGGCTGGGAGTGATTATCATCATTCCTGAAGACGCAGCTCATGTTGG AATCCTTGCAGAAGTTGCGGGTTTGATCTCAAAACATAATGTAAGCATACGCCAGGCGGTCTCGGACGACCCGTACCTGA CTGATAATCCCATGCTTACCATTATTACGGACAATAAAGTCCCTGGAGACCTCGTGGACGAAATTCTCAAGCTGCCTTCG GTAAAGGGAGTGAGTATTTACTGA
Upstream 100 bases:
>100_bases GAGATTGTTCGATTCGACTCGAGATTGCTTCATTTTGGTCCGGGATTAACAGCAATCAGTAAACTATATATCAGGGAACT CTTTTTAAACTTTAGTTTAT
Downstream 100 bases:
>100_bases CAGATCTTAACTCAATAATCCAGAGATTTAAGATTTCTGAAACAGGATTTCTTAAACCGGGTCTGAAGAGCCAGTCTAAG GCAGTAATCTATTGCTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MWQTLLKKFEKYPAQAKVLKLLFERGFQVNEEGKVTSGSIEIAHTQLAKEVGVDRRVVDATTKTIISDELLSTIFKNVHS IPFLRDVAPSLGLGVIIIIPEDAAHVGILAEVAGLISKHNVSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPS VKGVSIY
Sequences:
>Translated_167_residues MWQTLLKKFEKYPAQAKVLKLLFERGFQVNEEGKVTSGSIEIAHTQLAKEVGVDRRVVDATTKTIISDELLSTIFKNVHS IPFLRDVAPSLGLGVIIIIPEDAAHVGILAEVAGLISKHNVSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPS VKGVSIY >Mature_167_residues MWQTLLKKFEKYPAQAKVLKLLFERGFQVNEEGKVTSGSIEIAHTQLAKEVGVDRRVVDATTKTIISDELLSTIFKNVHS IPFLRDVAPSLGLGVIIIIPEDAAHVGILAEVAGLISKHNVSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPS VKGVSIY
Specific function: Unknown
COG id: COG2150
COG function: function code R; Predicted regulator of amino acid metabolism, contains ACT domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18300; Mature: 18300
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQTLLKKFEKYPAQAKVLKLLFERGFQVNEEGKVTSGSIEIAHTQLAKEVGVDRRVVDA CHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEECCCEEHHHHHHHHHHCCCCHHHHH TTKTIISDELLSTIFKNVHSIPFLRDVAPSLGLGVIIIIPEDAAHVGILAEVAGLISKHN HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC VSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPSVKGVSIY CHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MWQTLLKKFEKYPAQAKVLKLLFERGFQVNEEGKVTSGSIEIAHTQLAKEVGVDRRVVDA CHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEECCCEEHHHHHHHHHHCCCCHHHHH TTKTIISDELLSTIFKNVHSIPFLRDVAPSLGLGVIIIIPEDAAHVGILAEVAGLISKHN HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC VSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPSVKGVSIY CHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA