Click here to switch to the map view.

The map label for this gene is 21228447

Identifier: 21228447

GI number: 21228447

Start: 2802277

End: 2803761

Strand: Direct

Name: 21228447

Synonym: MM_2345

Alternate gene names: NA

Gene position: 2802277-2803761 (Clockwise)

Preceding gene: 21228446

Following gene: 21228448

Centisome position: 68.41

GC content: 36.36

Gene sequence:

>1485_bases
ATGTTTAGAAAATACGATCAAAAGCAGCAGTTTTTACTTCCATTAAACCTGGAAGATTTTGTTCCTGAAAATCATCTCGC
CCGAGTACTAAACGACATCGTAGATGTCGTTGATATCACTGCTATTGAATCCACTTATTCTAAGGAAGGCTGCCCAGCCT
ATCATCCAATAATTCTTTTAAAAATATTACTTTATGGTTATCTTATAGGCATTAGAAGTTCACGTAAACTGCAACAAATG
ACTCAAACTGATACTGCATTTATGTATCTGGCAGCCATGCAAAAACCTGATTTTCATACTATTTGTCGATTCCGTTCAAC
TCACCTTGGTCCTATTAAAGAGATATTTTCCCAGGTTGTCACTTTTTGTAAAGAAATGGATATGATTGGTTCCAGTATCT
CGATTGACGGAACAAAGATCAAGGCAAATGCTTCATCAAGACAAAGCAAGAGTTCGGATTCTCTCGAAAAAGAAATAGAT
CGGATACTAAAAGAGAGTATTGAGACAGATAAGTATGAAGATGAAATTTATGGTGACTCAACACCATATCAGATTCCAGA
AGAGCTAGTTGACAAGAAGAAAAGATTAGAGAAGATTAAAAACGCTAAGAAGAAGCTTGATGAAGAAAAGCTGAAAAAAG
TAAACATCACAGACAACGATGCTCGAATTATGAAATATAAAGATGGGAGCAAGAAACCTTCATACAACTGTCAGGTTGCT
GTTGACGAAAAGGAACAAATTATCGTTGCAGCAGACGTTGTCAACGAAGAAAACGACCTGCATCAAGTAGAACCAATCAT
ACAGAACGTAAAAAATACACTGGGATATAAACCAACAATCGTGCTTGCAGATGCAGGTTATTTTTCATATGAGAATCTGG
AATTTTTACAGGAAGAAGGCATTGATGCTTACATTCCTGACAACTACTATAAAGCTGAAAAAGAAGGAAAAACCAGGAAG
TTCAGGAAATCTCTTTTTAAATACGACGAAGAAAAAGACTGCTATTATTGTCCTGCTGCTTTTGAAATTCCCTTTTCAAG
AATACAAAAGAGGAAAGGTGAGCCTGATTTAAGGTATTATGTCTGTAGCTATTGTTCTCAGTGTGTGTTGAAAAATGCAT
GTACTGAGAGTGGAAAAAGAACAATAACAAGAGATCCTCGAGAACATTTAATGAAGGATATGAGGGCTAAACTGAACACA
GAAGAGGGTACGGAAAAGTATCAGAAAAGAATGTCTACCGTAGAACCTGTGTTTGGACAGATGAAACAGGATAGAGGGTT
TAGGGAATTTCTGCTGAGGGGGAAAAGGAAAACAGGAATTGAATTTGTTATGATGTGCACTGTACACAATATAAAGAAAA
TAGCAGATTTCATAAAAAGACAAGGGAAAAACCTGAAAGAAATGCTGAAAATGATAGTTGGAGGAGAAAGTAAAGGATGG
AATAAGGGGAGAATTCAAGCGAGAATGGCAAATACGCTATGTTGA

Upstream 100 bases:

>100_bases
TAATCCCAACAGGTTGTCTCAAAACTATACCTGATCGCACATTTGGGTCAGAAACCCGTAATCTTTATCTTTTTTACAAA
ACTAAATTCCAGTGTTTCCC

Downstream 100 bases:

>100_bases
GCTATGAAAATTTACTTTTTCTTGTTGAAATGAAATAAAAATTGAAAGGGCATTACCCAATTGTAGAATTAAAAATGGTT
TTGAGACTACCTGCCAATAT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; ISPsy6 Transposase; ISBma2 Transposase; Transposase Is4 Family Protein; ISCps6 Transposase; ISNCY Family Transposase; ISCpe5 Transposase; Phage-Associated Cell Wall Hydrolase; Transposase Is4 Family; Transposase ISNCY Family Protein; Transposase For IS; ISPpu20 Transposase

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MFRKYDQKQQFLLPLNLEDFVPENHLARVLNDIVDVVDITAIESTYSKEGCPAYHPIILLKILLYGYLIGIRSSRKLQQM
TQTDTAFMYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKIKANASSRQSKSSDSLEKEID
RILKESIETDKYEDEIYGDSTPYQIPEELVDKKKRLEKIKNAKKKLDEEKLKKVNITDNDARIMKYKDGSKKPSYNCQVA
VDEKEQIIVAADVVNEENDLHQVEPIIQNVKNTLGYKPTIVLADAGYFSYENLEFLQEEGIDAYIPDNYYKAEKEGKTRK
FRKSLFKYDEEKDCYYCPAAFEIPFSRIQKRKGEPDLRYYVCSYCSQCVLKNACTESGKRTITRDPREHLMKDMRAKLNT
EEGTEKYQKRMSTVEPVFGQMKQDRGFREFLLRGKRKTGIEFVMMCTVHNIKKIADFIKRQGKNLKEMLKMIVGGESKGW
NKGRIQARMANTLC

Sequences:

>Translated_494_residues
MFRKYDQKQQFLLPLNLEDFVPENHLARVLNDIVDVVDITAIESTYSKEGCPAYHPIILLKILLYGYLIGIRSSRKLQQM
TQTDTAFMYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKIKANASSRQSKSSDSLEKEID
RILKESIETDKYEDEIYGDSTPYQIPEELVDKKKRLEKIKNAKKKLDEEKLKKVNITDNDARIMKYKDGSKKPSYNCQVA
VDEKEQIIVAADVVNEENDLHQVEPIIQNVKNTLGYKPTIVLADAGYFSYENLEFLQEEGIDAYIPDNYYKAEKEGKTRK
FRKSLFKYDEEKDCYYCPAAFEIPFSRIQKRKGEPDLRYYVCSYCSQCVLKNACTESGKRTITRDPREHLMKDMRAKLNT
EEGTEKYQKRMSTVEPVFGQMKQDRGFREFLLRGKRKTGIEFVMMCTVHNIKKIADFIKRQGKNLKEMLKMIVGGESKGW
NKGRIQARMANTLC
>Mature_494_residues
MFRKYDQKQQFLLPLNLEDFVPENHLARVLNDIVDVVDITAIESTYSKEGCPAYHPIILLKILLYGYLIGIRSSRKLQQM
TQTDTAFMYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKIKANASSRQSKSSDSLEKEID
RILKESIETDKYEDEIYGDSTPYQIPEELVDKKKRLEKIKNAKKKLDEEKLKKVNITDNDARIMKYKDGSKKPSYNCQVA
VDEKEQIIVAADVVNEENDLHQVEPIIQNVKNTLGYKPTIVLADAGYFSYENLEFLQEEGIDAYIPDNYYKAEKEGKTRK
FRKSLFKYDEEKDCYYCPAAFEIPFSRIQKRKGEPDLRYYVCSYCSQCVLKNACTESGKRTITRDPREHLMKDMRAKLNT
EEGTEKYQKRMSTVEPVFGQMKQDRGFREFLLRGKRKTGIEFVMMCTVHNIKKIADFIKRQGKNLKEMLKMIVGGESKGW
NKGRIQARMANTLC

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57329; Mature: 57329

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKYDQKQQFLLPLNLEDFVPENHLARVLNDIVDVVDITAIESTYSKEGCPAYHPIILL
CCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KILLYGYLIGIRSSRKLQQMTQTDTAFMYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH
TFCKEMDMIGSSISIDGTKIKANASSRQSKSSDSLEKEIDRILKESIETDKYEDEIYGDS
HHHHHHHHCCCCEECCCCEEECCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
TPYQIPEELVDKKKRLEKIKNAKKKLDEEKLKKVNITDNDARIMKYKDGSKKPSYNCQVA
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEE
VDEKEQIIVAADVVNEENDLHQVEPIIQNVKNTLGYKPTIVLADAGYFSYENLEFLQEEG
ECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
IDAYIPDNYYKAEKEGKTRKFRKSLFKYDEEKDCYYCPAAFEIPFSRIQKRKGEPDLRYY
CCEECCCCHHCCHHCCHHHHHHHHHHCCCCCCCCEECCCHHCCCHHHHHHHCCCCHHHHH
VCSYCSQCVLKNACTESGKRTITRDPREHLMKDMRAKLNTEEGTEKYQKRMSTVEPVFGQ
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MKQDRGFREFLLRGKRKTGIEFVMMCTVHNIKKIADFIKRQGKNLKEMLKMIVGGESKGW
HHHCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
NKGRIQARMANTLC
CCCHHHHHHHHCCC
>Mature Secondary Structure
MFRKYDQKQQFLLPLNLEDFVPENHLARVLNDIVDVVDITAIESTYSKEGCPAYHPIILL
CCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KILLYGYLIGIRSSRKLQQMTQTDTAFMYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHH
TFCKEMDMIGSSISIDGTKIKANASSRQSKSSDSLEKEIDRILKESIETDKYEDEIYGDS
HHHHHHHHCCCCEECCCCEEECCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
TPYQIPEELVDKKKRLEKIKNAKKKLDEEKLKKVNITDNDARIMKYKDGSKKPSYNCQVA
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEE
VDEKEQIIVAADVVNEENDLHQVEPIIQNVKNTLGYKPTIVLADAGYFSYENLEFLQEEG
ECCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
IDAYIPDNYYKAEKEGKTRKFRKSLFKYDEEKDCYYCPAAFEIPFSRIQKRKGEPDLRYY
CCEECCCCHHCCHHCCHHHHHHHHHHCCCCCCCCEECCCHHCCCHHHHHHHCCCCHHHHH
VCSYCSQCVLKNACTESGKRTITRDPREHLMKDMRAKLNTEEGTEKYQKRMSTVEPVFGQ
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MKQDRGFREFLLRGKRKTGIEFVMMCTVHNIKKIADFIKRQGKNLKEMLKMIVGGESKGW
HHHCCCHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
NKGRIQARMANTLC
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA