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The map label for this gene is echD

Identifier: 21228425

GI number: 21228425

Start: 2781676

End: 2782017

Strand: Direct

Name: echD

Synonym: MM_2323

Alternate gene names: NA

Gene position: 2781676-2782017 (Clockwise)

Preceding gene: 21228424

Following gene: 21228426

Centisome position: 67.91

GC content: 38.3

Gene sequence:

>342_bases
ATGCTTAAGAATGAGGTAGAAATTAAAAGTAGCGAAGAGCTGCTAAAAACCGTAGAGCAATTAAAAAAGGATGGCTATCG
AAACGCTACTATGATATGCCTGAAAGCTAACGATGGTCATGATTTGATCTATGTCTTTGAAAAAGATTATAAACTGAAAA
ACCTGAGGTACTTTTTGAAACCAGGTGAGAAGCCCAAGAGTATATCAGGCATTTATCTAGGTGCACTCTTGATCGAGAAT
GAGTACCAGGATCTCTTCGGATTGACTTTCGAAGGTTTAGCAATAGACTATAAAGGCTACCTTTACTTAACGCCAAACAG
TCCGAAAGCTCCTTTAGCCTAA

Upstream 100 bases:

>100_bases
CTTGACGGCGTAGTAGCAGCACTTTCAATACTTGAAAATAAGAAGAAAGGGAACATCAAAGGAAAAGAAGTACCATTGAA
AGGAAAAGAGGTGCCATCGA

Downstream 100 bases:

>100_bases
AGCAATTTGAGAGGAGAATCATATGACAACTGTAATACCTTTTGGTCCTCAGCACCCCGTTTTACCCGAACCGGTAGCGT
TGAAACTTGAGCTTGACGAC

Product: ech hydrogenase subunit

Products: NA

Alternate protein names: Ech Hydrogenase Subunit EchD; Ech Hydrogenase Subunit D; Ech Hydrogenase Subunit

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLKNEVEIKSSEELLKTVEQLKKDGYRNATMICLKANDGHDLIYVFEKDYKLKNLRYFLKPGEKPKSISGIYLGALLIEN
EYQDLFGLTFEGLAIDYKGYLYLTPNSPKAPLA

Sequences:

>Translated_113_residues
MLKNEVEIKSSEELLKTVEQLKKDGYRNATMICLKANDGHDLIYVFEKDYKLKNLRYFLKPGEKPKSISGIYLGALLIEN
EYQDLFGLTFEGLAIDYKGYLYLTPNSPKAPLA
>Mature_113_residues
MLKNEVEIKSSEELLKTVEQLKKDGYRNATMICLKANDGHDLIYVFEKDYKLKNLRYFLKPGEKPKSISGIYLGALLIEN
EYQDLFGLTFEGLAIDYKGYLYLTPNSPKAPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12942; Mature: 12942

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNEVEIKSSEELLKTVEQLKKDGYRNATMICLKANDGHDLIYVFEKDYKLKNLRYFLK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEC
PGEKPKSISGIYLGALLIENEYQDLFGLTFEGLAIDYKGYLYLTPNSPKAPLA
CCCCCCCCCEEEEEEEEECCCCHHHHCCEECCEEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure
MLKNEVEIKSSEELLKTVEQLKKDGYRNATMICLKANDGHDLIYVFEKDYKLKNLRYFLK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEC
PGEKPKSISGIYLGALLIENEYQDLFGLTFEGLAIDYKGYLYLTPNSPKAPLA
CCCCCCCCCEEEEEEEEECCCCHHHHCCEECCEEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA