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The map label for this gene is nusA

Identifier: 21228370

GI number: 21228370

Start: 2694046

End: 2694471

Strand: Reverse

Name: nusA

Synonym: MM_2268

Alternate gene names: NA

Gene position: 2694471-2694046 (Counterclockwise)

Preceding gene: 21228371

Following gene: 21228369

Centisome position: 65.78

GC content: 42.49

Gene sequence:

>426_bases
TTGGGTGAAATAAGACTTACTGCAGAAAGCATCCAGTACATTGCATTGTTTGAAAACATGACACGGGCCAAGATACTTGA
CTGTATCCCGGAAGAGGAAAGGCTTGTGTATGTTGTAAAGCAGGGCGATATGGGGCTTGCAATAGGCAAAAACGGAGAAA
ATATAAACCGTGTTAAAAAAGCCCTGGACAAACCCATTGAGCTTGTGGAGTATTCAGAGGATCCTGTAACTTTTATCAAG
AACGCCTTCGGACCGGTATCTGTAAGTTCAGTGAACCTTACAAATAAAAATGGCAAGCGATTAGCTTATGTAGAGGTACC
CAATAAAGAGAAGGGACTTGCCATCGGTCGCAACGGTAAGAATATAGAGAAAGTGAAAATGCTTGCACGTCGTCATCACA
ATATAGAAGACGTGATCCTGCAGTGA

Upstream 100 bases:

>100_bases
TATGCGGAAAGCCGTTCACGATTGCAGCCATGGCAATCCTTGATGCAGGCGAATCAGATATACTTGCAGCTACAGCTTGA
GAAAAAGGAGTTGCAGCGTC

Downstream 100 bases:

>100_bases
TATCCCTTTAATTTACGTTGATCCATTAATCCGGCGTTGAAGGACAATTCTTGCATTTGATGCAAAATCAGGAAACTGTG
ATCAATTATTAACGGAGAAT

Product: transcription elongation factor NusA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGEIRLTAESIQYIALFENMTRAKILDCIPEEERLVYVVKQGDMGLAIGKNGENINRVKKALDKPIELVEYSEDPVTFIK
NAFGPVSVSSVNLTNKNGKRLAYVEVPNKEKGLAIGRNGKNIEKVKMLARRHHNIEDVILQ

Sequences:

>Translated_141_residues
MGEIRLTAESIQYIALFENMTRAKILDCIPEEERLVYVVKQGDMGLAIGKNGENINRVKKALDKPIELVEYSEDPVTFIK
NAFGPVSVSSVNLTNKNGKRLAYVEVPNKEKGLAIGRNGKNIEKVKMLARRHHNIEDVILQ
>Mature_140_residues
GEIRLTAESIQYIALFENMTRAKILDCIPEEERLVYVVKQGDMGLAIGKNGENINRVKKALDKPIELVEYSEDPVTFIKN
AFGPVSVSSVNLTNKNGKRLAYVEVPNKEKGLAIGRNGKNIEKVKMLARRHHNIEDVILQ

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212 [H]

Pfam domain/function: PF07650 KH_2 [H]

EC number: NA

Molecular weight: Translated: 15849; Mature: 15717

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIRLTAESIQYIALFENMTRAKILDCIPEEERLVYVVKQGDMGLAIGKNGENINRVKK
CCCEEEEHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
ALDKPIELVEYSEDPVTFIKNAFGPVSVSSVNLTNKNGKRLAYVEVPNKEKGLAIGRNGK
HHCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCC
NIEKVKMLARRHHNIEDVILQ
CHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
GEIRLTAESIQYIALFENMTRAKILDCIPEEERLVYVVKQGDMGLAIGKNGENINRVKK
CCEEEEHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH
ALDKPIELVEYSEDPVTFIKNAFGPVSVSSVNLTNKNGKRLAYVEVPNKEKGLAIGRNGK
HHCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCC
NIEKVKMLARRHHNIEDVILQ
CHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840672 [H]