| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228355
Identifier: 21228355
GI number: 21228355
Start: 2679995
End: 2681923
Strand: Reverse
Name: 21228355
Synonym: MM_2253
Alternate gene names: NA
Gene position: 2681923-2679995 (Counterclockwise)
Preceding gene: 21228357
Following gene: 21228354
Centisome position: 65.47
GC content: 45.78
Gene sequence:
>1929_bases ATGCAGTATAGCCTGGGGATTGATGCAGGAGGCACATACACAGATGCTGTGATTATAAGGGACTCGGATGGCATCATTGT CGATTCAAATAAGGCACTTACAACCTACCCGGATCTTCACCCTGGTATCAAAAACGTACTCGACAGCCTGAACCCTGATT ACCTGAAAAACACAAAGCTGGTTTCGGTTTCCACAACTCTTTCTACCAATACAATTCTAGAGGGCACTGGTTTTCCAGTA GCCGTGATCCTTATAGGAGATCATCCACTTGAACGAGAACTACCGACCGAATATGTACTTTATGTTACAGGTGGACACGA CCACAATGGGGAAGAAAAGGCTTCACTCAACCTGGAAGCTATTGAGAAATTCTCCCTTAATGTTAAGGGCAGGGTTTTAG CTTTTGCCATATCGTCATATTTTAGCACTAGAAACCCGGAACACGAACTGAAAGCAAAGGACCGAATCCTTGAGCTTACG GGGCTGCCTGTGGTTTGCGGGCATGAGCTTTCCCAGGAACTGGGAGCTTACGAAAGGGCAGTAACAGCTTTTCTTAATGC GCAGCTAATCCCCATAACAGGGCAGTTCGTACAGTCCATAATCACAGATATAAAAGAGCGGGGAATTAATGCCAGGCTCC TTATGCTAAAATGTGACGGTTCAGTTGTCGGAATCAAAGATGCCCTGAGAAAGCCAATAGAAACTATATTCTCAGGTCCG GCAGCAAGTCTTATTGGAGCTTCTTACCTCTCTGGACTTGAGACCTGTGCCGTAATTGATGTAGGAGGCACAAGTACGGA CATCTCCTCGATCCATATAGGCGTTCCTGATCTGAACAACGAGGGAGCTGTTGTAGGGGGCTGGAAAACCCGCGTTAGAG CGATAAGGATGGAAACAACGGCTACAGGCGGGGACAGCCACATCTGGACAGTAAATAGGGAACTCTACCTTGGACCCAGG AGAGTTATACCGCTTGCAGTCGCTGCAGTAAAATACCCAAATTTTCTGAATAATCTCAAAAGGACTCCAATGCCTGCCAG AGAAAATCTGTGTGAGAACATTCAGCCCACAAAGTTTTTTGCCAGATCAGGATATATTGCAGGTGAGCTGAGTAAAGCCG AAGCCGAAGTACTGAAGGTAATAGGAGAAGAACCTGTTTCTGTGTTCGAAATATCAGCCCTTACAAGAAAAGACTTTCAT CCTCAGACGCTTGACTGTCTCATCAAAAAACGCCTTGTTCAGGTAATTGGCTTTACACCAACAGACGCTCTGCATGTGTT AGGGGAATACACAGCCTGGCGTGAAGAAGCTTCGCGTACAGGAGCAGAAAGGCTTGGAAGACTCATGCGCATGACACCAA TAGAATTCTGTACTGCCGTAAAAAAGAAAGTTGCCAGAAATATGGCACTTCATCTTCTCTCGTATATCCTGACAGGTGTC CCATGCGAATCCATTGAGAAGATTTTGGACGTAGACTATCCCGCAAAATTCAAACTGCAACTTCCTGTTGTCCTGCTTGG AGGACCTGTTAGAGCGCATAGAAAGGAACTGGAAGAACTGATAGATGCAGATATCCTGGTTCCAGAACATGCCGAGGTAG GGAATGCAGTTGGAGCACTTGTAGGAAAAGGAATCAAAAGAGCTGAAATTCTCATAAGGCCAGAGAGCCTCATGTCTCCT GACAGGGATTTTCTTGTCTTTGCCCCGGGAAGCAGACTGAAATTTGAGACTTACTCAAAAGCTTTGGAGAAAGCAACCGA GATTGGAAAAAAGCTTGTTGAAGATTATATGAAAGAATGTGGGCTCAGTGGCAACCAGGTTGAAATCTCTAGTGAGAAAA AGACCGTTTCTCCTGACGGCTGGAACCATCCTCCTATGGAAACAAATCTGCTGGTTGTGGGAGTAGGTATGAGAGAATTG CACGTTTGA
Upstream 100 bases:
>100_bases CTTTATGTGCTTTATAAATTTAAATAAAATGGATAATTGTGAAAATAAAAGAATATCAATAATTTCCTTAAAAAAGTAGC AAAAAAGGAGTAGTTTCAAC
Downstream 100 bases:
>100_bases GCAACTGACTCAGAATCGAATCATGAAAGCTGGCAAGGGTTTTTAAAAAACAATTAATAAGTTTGTCTTATCAGGCTATA CCCAGGATCCACGTTTAAGA
Product: dihydropyrimidinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MQYSLGIDAGGTYTDAVIIRDSDGIIVDSNKALTTYPDLHPGIKNVLDSLNPDYLKNTKLVSVSTTLSTNTILEGTGFPV AVILIGDHPLERELPTEYVLYVTGGHDHNGEEKASLNLEAIEKFSLNVKGRVLAFAISSYFSTRNPEHELKAKDRILELT GLPVVCGHELSQELGAYERAVTAFLNAQLIPITGQFVQSIITDIKERGINARLLMLKCDGSVVGIKDALRKPIETIFSGP AASLIGASYLSGLETCAVIDVGGTSTDISSIHIGVPDLNNEGAVVGGWKTRVRAIRMETTATGGDSHIWTVNRELYLGPR RVIPLAVAAVKYPNFLNNLKRTPMPARENLCENIQPTKFFARSGYIAGELSKAEAEVLKVIGEEPVSVFEISALTRKDFH PQTLDCLIKKRLVQVIGFTPTDALHVLGEYTAWREEASRTGAERLGRLMRMTPIEFCTAVKKKVARNMALHLLSYILTGV PCESIEKILDVDYPAKFKLQLPVVLLGGPVRAHRKELEELIDADILVPEHAEVGNAVGALVGKGIKRAEILIRPESLMSP DRDFLVFAPGSRLKFETYSKALEKATEIGKKLVEDYMKECGLSGNQVEISSEKKTVSPDGWNHPPMETNLLVVGVGMREL HV
Sequences:
>Translated_642_residues MQYSLGIDAGGTYTDAVIIRDSDGIIVDSNKALTTYPDLHPGIKNVLDSLNPDYLKNTKLVSVSTTLSTNTILEGTGFPV AVILIGDHPLERELPTEYVLYVTGGHDHNGEEKASLNLEAIEKFSLNVKGRVLAFAISSYFSTRNPEHELKAKDRILELT GLPVVCGHELSQELGAYERAVTAFLNAQLIPITGQFVQSIITDIKERGINARLLMLKCDGSVVGIKDALRKPIETIFSGP AASLIGASYLSGLETCAVIDVGGTSTDISSIHIGVPDLNNEGAVVGGWKTRVRAIRMETTATGGDSHIWTVNRELYLGPR RVIPLAVAAVKYPNFLNNLKRTPMPARENLCENIQPTKFFARSGYIAGELSKAEAEVLKVIGEEPVSVFEISALTRKDFH PQTLDCLIKKRLVQVIGFTPTDALHVLGEYTAWREEASRTGAERLGRLMRMTPIEFCTAVKKKVARNMALHLLSYILTGV PCESIEKILDVDYPAKFKLQLPVVLLGGPVRAHRKELEELIDADILVPEHAEVGNAVGALVGKGIKRAEILIRPESLMSP DRDFLVFAPGSRLKFETYSKALEKATEIGKKLVEDYMKECGLSGNQVEISSEKKTVSPDGWNHPPMETNLLVVGVGMREL HV >Mature_642_residues MQYSLGIDAGGTYTDAVIIRDSDGIIVDSNKALTTYPDLHPGIKNVLDSLNPDYLKNTKLVSVSTTLSTNTILEGTGFPV AVILIGDHPLERELPTEYVLYVTGGHDHNGEEKASLNLEAIEKFSLNVKGRVLAFAISSYFSTRNPEHELKAKDRILELT GLPVVCGHELSQELGAYERAVTAFLNAQLIPITGQFVQSIITDIKERGINARLLMLKCDGSVVGIKDALRKPIETIFSGP AASLIGASYLSGLETCAVIDVGGTSTDISSIHIGVPDLNNEGAVVGGWKTRVRAIRMETTATGGDSHIWTVNRELYLGPR RVIPLAVAAVKYPNFLNNLKRTPMPARENLCENIQPTKFFARSGYIAGELSKAEAEVLKVIGEEPVSVFEISALTRKDFH PQTLDCLIKKRLVQVIGFTPTDALHVLGEYTAWREEASRTGAERLGRLMRMTPIEFCTAVKKKVARNMALHLLSYILTGV PCESIEKILDVDYPAKFKLQLPVVLLGGPVRAHRKELEELIDADILVPEHAEVGNAVGALVGKGIKRAEILIRPESLMSP DRDFLVFAPGSRLKFETYSKALEKATEIGKKLVEDYMKECGLSGNQVEISSEKKTVSPDGWNHPPMETNLLVVGVGMREL HV
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.2
Molecular weight: Translated: 70252; Mature: 70252
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYSLGIDAGGTYTDAVIIRDSDGIIVDSNKALTTYPDLHPGIKNVLDSLNPDYLKNTKL CCEEECCCCCCCEEEEEEEECCCCEEEECCCCEEECCCCCHHHHHHHHCCCCCHHCCCEE VSVSTTLSTNTILEGTGFPVAVILIGDHPLERELPTEYVLYVTGGHDHNGEEKASLNLEA EEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCHHH IEKFSLNVKGRVLAFAISSYFSTRNPEHELKAKDRILELTGLPVVCGHELSQELGAYERA HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCEEECHHHHHHHHHHHHH VTAFLNAQLIPITGQFVQSIITDIKERGINARLLMLKCDGSVVGIKDALRKPIETIFSGP HHHHHCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCEECHHHHHHHHHHHHHCCC AASLIGASYLSGLETCAVIDVGGTSTDISSIHIGVPDLNNEGAVVGGWKTRVRAIRMETT HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEECHHHEEEEEEEEEE ATGGDSHIWTVNRELYLGPRRVIPLAVAAVKYPNFLNNLKRTPMPARENLCENIQPTKFF CCCCCCEEEEECCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCHHH ARSGYIAGELSKAEAEVLKVIGEEPVSVFEISALTRKDFHPQTLDCLIKKRLVQVIGFTP HHCCCEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCC TDALHVLGEYTAWREEASRTGAERLGRLMRMTPIEFCTAVKKKVARNMALHLLSYILTGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PCESIEKILDVDYPAKFKLQLPVVLLGGPVRAHRKELEELIDADILVPEHAEVGNAVGAL CHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH VGKGIKRAEILIRPESLMSPDRDFLVFAPGSRLKFETYSKALEKATEIGKKLVEDYMKEC HHCCCCEEEEEECCHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGNQVEISSEKKTVSPDGWNHPPMETNLLVVGVGMRELHV CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCC >Mature Secondary Structure MQYSLGIDAGGTYTDAVIIRDSDGIIVDSNKALTTYPDLHPGIKNVLDSLNPDYLKNTKL CCEEECCCCCCCEEEEEEEECCCCEEEECCCCEEECCCCCHHHHHHHHCCCCCHHCCCEE VSVSTTLSTNTILEGTGFPVAVILIGDHPLERELPTEYVLYVTGGHDHNGEEKASLNLEA EEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCHHH IEKFSLNVKGRVLAFAISSYFSTRNPEHELKAKDRILELTGLPVVCGHELSQELGAYERA HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCEEECHHHHHHHHHHHHH VTAFLNAQLIPITGQFVQSIITDIKERGINARLLMLKCDGSVVGIKDALRKPIETIFSGP HHHHHCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCEECHHHHHHHHHHHHHCCC AASLIGASYLSGLETCAVIDVGGTSTDISSIHIGVPDLNNEGAVVGGWKTRVRAIRMETT HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEECHHHEEEEEEEEEE ATGGDSHIWTVNRELYLGPRRVIPLAVAAVKYPNFLNNLKRTPMPARENLCENIQPTKFF CCCCCCEEEEECCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCHHH ARSGYIAGELSKAEAEVLKVIGEEPVSVFEISALTRKDFHPQTLDCLIKKRLVQVIGFTP HHCCCEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCC TDALHVLGEYTAWREEASRTGAERLGRLMRMTPIEFCTAVKKKVARNMALHLLSYILTGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PCESIEKILDVDYPAKFKLQLPVVLLGGPVRAHRKELEELIDADILVPEHAEVGNAVGAL CHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH VGKGIKRAEILIRPESLMSPDRDFLVFAPGSRLKFETYSKALEKATEIGKKLVEDYMKEC HHCCCCEEEEEECCHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGNQVEISSEKKTVSPDGWNHPPMETNLLVVGVGMRELHV CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]