| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228314
Identifier: 21228314
GI number: 21228314
Start: 2632447
End: 2633598
Strand: Direct
Name: 21228314
Synonym: MM_2212
Alternate gene names: NA
Gene position: 2632447-2633598 (Clockwise)
Preceding gene: 21228313
Following gene: 21228319
Centisome position: 64.26
GC content: 25.35
Gene sequence:
>1152_bases ATGAATGATTTATCTACTCAAAAAAATAAGAGAATTGGGGAAGTCGACTATTTAAGAGGATTTGCTGTGCTAGCAGTAAT AGCTATCCACACCTCTTCGAACTCACAAATACTAAATCTAAATTTGTTATTAATAGTAAACTTAATAATAGACGTATTTT CACACTTTGCTGTCCCGTTATTCATATTTATATCTGGTTTTGTTCTTTCCCTCAATTATAGAGGTCTATTTTCACAAAAA ACATTTTACAAAAAGAGAGCTAAATCAATACTTCCTCAATATATAATCTTTTCAATATTATATTTGTTACTTAATATAAT AATTTCTGAAATACATGGTAATCTGGAATATCCTTCTATAAAGACAGTAATATTTTACTTTCTTACTGCGGGTAGTTCTT ATCATTTATGGTATTTTTCTTTAATAATTCAATTTTATCTATTTTATCCTTATATTATAAAGATATATGAAAAGTTTGTG GGTAATTATGAAACAATTTTTATATTTTTAGCACTGATTGCACAACAATTATGGATAGTAATTAAAATGATTGCAATAAA TTATATTAATTCAAGCACTCACTTTAGCTCATTAACTTATTTTATATCAATTTACTTTGTAGATCGTGCATTTTTTTCTT ATATTTTTTATTTTATACTTGGTATCTATTTATGCCGAAATTATGAATACGTAACAGATAAAGTTTTTCAAAATAAAAAA TGGATTATTGTAACAATAGTAGTCTTTACAGGAGCAATTTCTGCTTTACAGATAAATGGTATCATTAAATATGGAAGTTA CCGTAGCATCCCTCAATCTTATTTTTTAGTTTCTAACCTTCTTGACTCAATATACTTTCCACTTATTTTTTCAATGCTTT CTATAATCAGTTTAAATATTCATACTAATAAATATAAATATTCAAAATATTTAAATGTTTTTTCACTGATTGGCAAATAT TCTTTTGGGATTTATTTAATCCATGTTTTATATATTACACTGATCGGTACACTAATATTTCCACGGCTTGGTATCGACCC TTATCATTTAATATTTTATCCTGTTCTGTTTATATCGGTACTTATACTAAGTTATTTTAGTATTTACTTGATATCCTATC TGCCTTACAGTAAAATAATAATAGGGAATTAA
Upstream 100 bases:
>100_bases TTAATGGGGCAAGACTGAATGTTATCAGAAGCTAATCCGGCAATGTTTCGTATCGATACTAAAATAATATTATATAACTT TAAGTGCTCTTTATGCAAGT
Downstream 100 bases:
>100_bases ATAACTAATCCAAAAACTCAGAATCGTGTTATTAATTTCTAATTCGTAATAGTTCATTCCAAAGCAATTTAATTCTCAAA AATCAGAAAGTTTCAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MNDLSTQKNKRIGEVDYLRGFAVLAVIAIHTSSNSQILNLNLLLIVNLIIDVFSHFAVPLFIFISGFVLSLNYRGLFSQK TFYKKRAKSILPQYIIFSILYLLLNIIISEIHGNLEYPSIKTVIFYFLTAGSSYHLWYFSLIIQFYLFYPYIIKIYEKFV GNYETIFIFLALIAQQLWIVIKMIAINYINSSTHFSSLTYFISIYFVDRAFFSYIFYFILGIYLCRNYEYVTDKVFQNKK WIIVTIVVFTGAISALQINGIIKYGSYRSIPQSYFLVSNLLDSIYFPLIFSMLSIISLNIHTNKYKYSKYLNVFSLIGKY SFGIYLIHVLYITLIGTLIFPRLGIDPYHLIFYPVLFISVLILSYFSIYLISYLPYSKIIIGN
Sequences:
>Translated_383_residues MNDLSTQKNKRIGEVDYLRGFAVLAVIAIHTSSNSQILNLNLLLIVNLIIDVFSHFAVPLFIFISGFVLSLNYRGLFSQK TFYKKRAKSILPQYIIFSILYLLLNIIISEIHGNLEYPSIKTVIFYFLTAGSSYHLWYFSLIIQFYLFYPYIIKIYEKFV GNYETIFIFLALIAQQLWIVIKMIAINYINSSTHFSSLTYFISIYFVDRAFFSYIFYFILGIYLCRNYEYVTDKVFQNKK WIIVTIVVFTGAISALQINGIIKYGSYRSIPQSYFLVSNLLDSIYFPLIFSMLSIISLNIHTNKYKYSKYLNVFSLIGKY SFGIYLIHVLYITLIGTLIFPRLGIDPYHLIFYPVLFISVLILSYFSIYLISYLPYSKIIIGN >Mature_383_residues MNDLSTQKNKRIGEVDYLRGFAVLAVIAIHTSSNSQILNLNLLLIVNLIIDVFSHFAVPLFIFISGFVLSLNYRGLFSQK TFYKKRAKSILPQYIIFSILYLLLNIIISEIHGNLEYPSIKTVIFYFLTAGSSYHLWYFSLIIQFYLFYPYIIKIYEKFV GNYETIFIFLALIAQQLWIVIKMIAINYINSSTHFSSLTYFISIYFVDRAFFSYIFYFILGIYLCRNYEYVTDKVFQNKK WIIVTIVVFTGAISALQINGIIKYGSYRSIPQSYFLVSNLLDSIYFPLIFSMLSIISLNIHTNKYKYSKYLNVFSLIGKY SFGIYLIHVLYITLIGTLIFPRLGIDPYHLIFYPVLFISVLILSYFSIYLISYLPYSKIIIGN
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44795; Mature: 44795
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLSTQKNKRIGEVDYLRGFAVLAVIAIHTSSNSQILNLNLLLIVNLIIDVFSHFAVPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH FIFISGFVLSLNYRGLFSQKTFYKKRAKSILPQYIIFSILYLLLNIIISEIHGNLEYPSI HHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KTVIFYFLTAGSSYHLWYFSLIIQFYLFYPYIIKIYEKFVGNYETIFIFLALIAQQLWIV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IKMIAINYINSSTHFSSLTYFISIYFVDRAFFSYIFYFILGIYLCRNYEYVTDKVFQNKK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC WIIVTIVVFTGAISALQINGIIKYGSYRSIPQSYFLVSNLLDSIYFPLIFSMLSIISLNI EEEEEHHHHHCCHHHEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HTNKYKYSKYLNVFSLIGKYSFGIYLIHVLYITLIGTLIFPRLGIDPYHLIFYPVLFISV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LILSYFSIYLISYLPYSKIIIGN HHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MNDLSTQKNKRIGEVDYLRGFAVLAVIAIHTSSNSQILNLNLLLIVNLIIDVFSHFAVPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHH FIFISGFVLSLNYRGLFSQKTFYKKRAKSILPQYIIFSILYLLLNIIISEIHGNLEYPSI HHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KTVIFYFLTAGSSYHLWYFSLIIQFYLFYPYIIKIYEKFVGNYETIFIFLALIAQQLWIV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IKMIAINYINSSTHFSSLTYFISIYFVDRAFFSYIFYFILGIYLCRNYEYVTDKVFQNKK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC WIIVTIVVFTGAISALQINGIIKYGSYRSIPQSYFLVSNLLDSIYFPLIFSMLSIISLNI EEEEEHHHHHCCHHHEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HTNKYKYSKYLNVFSLIGKYSFGIYLIHVLYITLIGTLIFPRLGIDPYHLIFYPVLFISV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LILSYFSIYLISYLPYSKIIIGN HHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA